Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01482 ATGACTGTCATACTTATACTGTTTATCCCTTCTCTTGTTTCCGCAGTAGATGACACATCATCCATTTCGCAGTCCCAGCCACTCAGTTATGGAAAGACCGTAGTTTCTCACCCACATGGAACCTTTGAGCTTGGTTTCTTCCATCTTGGAAATCCCAACAAGATCTACCTCGGGATATGGTACAAGAATATTCCGGTTGAAAACGTTGTTTGGGTTGCAAACGGTGGCAATCCTATCAATGATTCTTCTGCCATCTTGAAACTAAACAGTTCTGGCAACTTGGTACTTACACACAACCACATGGTTGTTTGGTGCACGAGTTCACCAAACGATGCACACAATCCAGTAGCAGTGCTTTTGGATTCTGAGAGGTCAAAGCCAGAAAATAACAGTGAAACATGTGTGGATGATTTGGATCTCCCATTGTTTGATTTGTCAACAATTGCGGCAGCCACTGATAATTTCTCAGGGAGGAACCGGATTGGGGAAGGTGGTTTTGGACCTGTGTATTGGGGAAAGTTATTCGGAGGACTAGAAATTGCTGTAAAGAGACTTTCACAGAATTCAGGACAAGGAGTAACCGAGTTTGTAAATGAAGTTAAACTGATTGCAAAACTTCAGCACCGGAATCTTGTAAAACTTCTAGGCTGTTGCATTCAGAACCAAGAAAAAATACTGGTTTATGAATACATGTCTAATGGCAGCCTAGATTACTTCATTTTTGATCATACCAGAGGTAAATCCCTTGACTGGCCAAAGCGTTTCCATATAATTTGCGGACTTGCTAGAGGACTAACGTATCTTCATGAAGATTCTCGATTAAGGATTGTCCATAGAGACCTCAAAGGGAGTAATGTTCTTCTAGATGAGGATTTCAATCCAAAAATATCAGATTTTGGATTGGCTAAAACTATTGGAAGAGAGGAGATTGAAGGAAACACAAATATGATAGTTGGAACATTGTGA 966 0.4068 MTVILILFIPSLVSAVDDTSSISQSQPLSYGKTVVSHPHGTFELGFFHLGNPNKIYLGIWYKNIPVENVVWVANGGNPINDSSAILKLNSSGNLVLTHNHMVVWCTSSPNDAHNPVAVLLDSERSKPENNSETCVDDLDLPLFDLSTIAAATDNFSGRNRIGEGGFGPVYWGKLFGGLEIAVKRLSQNSGQGVTEFVNEVKLIAKLQHRNLVKLLGCCIQNQEKILVYEYMSNGSLDYFIFDHTRGKSLDWPKRFHIICGLARGLTYLHEDSRLRIVHRDLKGSNVLLDEDFNPKISDFGLAKTIGREEIEGNTNMIVGTL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01482 321 Pfam Protein tyrosine and serine/threonine kinase 159 308 IPR001245 GO:0004672|GO:0006468
Lapu11g01482 321 SUPERFAMILY alpha-D-mannose-specific plant lectins 53 122 IPR036426 -
Lapu11g01482 321 CDD B_lectin 25 122 IPR001480 -
Lapu11g01482 321 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 231 321 - -
Lapu11g01482 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lapu11g01482 321 Gene3D - 14 130 IPR036426 -
Lapu11g01482 321 Pfam D-mannose binding lectin 69 122 IPR001480 -
Lapu11g01482 321 ProSiteProfiles Protein kinase domain profile. 155 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01482 321 Gene3D Transferase(Phosphotransferase) domain 1 231 321 - -
Lapu11g01482 321 SMART serkin_6 155 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01482 321 SMART blect_4 25 133 IPR001480 -
Lapu11g01482 321 Gene3D Phosphorylase Kinase; domain 1 131 230 - -
Lapu11g01482 321 ProSiteProfiles Bulb-type lectin domain profile. 19 155 IPR001480 -
Lapu11g01482 321 FunFam receptor-like serine/threonine-protein kinase SD1-8 126 230 - -
Lapu11g01482 321 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 321 - -
Lapu11g01482 321 SUPERFAMILY Protein kinase-like (PK-like) 134 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01482 Lapu-Chr11 18304318 18307131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01482 123 320 Receptor kinase-like Gene Family AT4G23190 57.576 9.09e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01482 PK_Tyr_Ser-Thr 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01482 - - gmx:100808807 343.199