Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01469 ATGCCTTCTAACGCCATCATCCAATACACCTCTTCTTCGTCTCATGCAATTAACACATATGACGTATTTGTGAGCTTCCGTGGTGAAGACACGCGCAACAACTTCACTGGTTTTCTCTTTGAAGCTCTCCGCAGAAAAGGCATCGACGCCTTCAAAGATGATGAAGATCTCAGAAAAGGTGAATCCATTGCACCCGAGCTGCTGCAAGCCATTCAAGGGTCTCGAATTTTCATTGTTGTCTTCTCAAAGAACTATGCTTCCTCTACTTGGTGCTTGCGTGAGCTGGCAGAGATATGTCACTGCGTTCAAACTTGGCCAAGACGTGTTATACCTATATTTTATGACGTTGATCCTTCGGTGGTGCGCAAACAGAGTGGATGTTATGAGGAAGCATTTGCAGAACACGAAGAAAGATTGAGAGAAGATAAAGAGAAGATGGAGGAAGCTCAGAGATGGAGAGATGCTCTCACACAAGTGGCCAATCTCTCTGGTTGGGATATCCGAAATAAGTCACAGTATGTACAAATTGAAGAAATTGTTGAAAACATAATAAATATTTTGGGTCTTAAAATTTCGTGTCTTCCAAGGGATGAATTAGTTGGAATAGAGTCTCGAGTTGAAGAATTAACAAATCTTCTATGTTTTAGGGCATCTAATGAGGTCCGAGTTGTTGGAATTAGTGGGATGAGTGGCATAGGAAAGACAACTCTTGCTCGAGCTTTATACGAGAGAATCTTTCATCAATATGATTTTCATTGTTTTATTGATGATGTGAGTAAACTTTATCGAGATTTTAGTTCATTAGGTGTACAAAAGAAGTTAATTTCCCAGTCCCTAAACGAGAAAAATCTAGAGATTTACAATGCTTTTGAGGGAACATGTTTGGCGTGGACTAGGCTACACAATGCTAGGGCACTTGTAGTTCTTGACAGTGTTGATCAAGTTGAACAACTAAGGATATTTACAGGGAATAGAGATACTTTGTTGCGTGAATGCTTAGGTGGAGGGAGCAGAATCATCATAGTTTCTAGGGATGAACATCTATTGAGAACACATGGAGTGGATGATGTTTATCAAGTCCAGCCGTTGGATGAGAAAAGTGCTGCCCAACTGTTTTGTAGAAATGCTTTCAAAGTTAATTATATTTTGAGCGATTATGAACAGTTGGCACGTGATGTACTTTCGAATGTTCAAGGCCATCCCTTGGCAATTGAAGTAATTGGCTCATCTTTGTTTGGTCGACCTGTCTCGCAATGGAAAAGTGCATTGGCAAGGCTAAAGGAAAACAAAAGTAAAAATATTATGGATGTTTTGCGTATGAGTTTTGATCAGTTGGAAGAAGAAGAGAAAGAAATATTTCTTGATATTGCATGCTTTCTCCACGGTTATGATGAGAGATATGCGAAGGAAGTCCTAAATTTTCGCGGATTTCATCCTGAATATGGCATACAGGTTCTTCTTGATAAATCACTCATAACCAAGAAATATGGGAAGATTTTTATGCATAACTTGCTAATGGATTTGGGCAGATGTATTGTTCGAGAAAAATCACCTAAGGAGCCTATAAAATGGAGTAGGTTGTGGGACTACCAAGATCTCCAGAAAGCTTTGTTAGGCGATCAGACAATTGAAAATGTTGAAGCCATAGTTGTTGAACGCAATGTATGGAAGTTTGATGAGACTACAACTAGGGTAGATGGTTTATCAAAAATTAAACACCTTAAGTTGCTTCAACTTGAGAACAAGAACATTTCAGGAAGCATTAACCATCTTTCGAGTGAATTGGGATATCTTACTTGGAAGAAATATCCTTTTAAGTGTTTGCCTCAAAGTTTTGAGCCGAACAAACTGATTGAGTTAAACCTGAGTGAGAGCAGTATTCAACGACTGTGGGAAGGCACAAAGCCGCTACACAATTTGAAGCGCTTGGATCTCTCTTACTCCGAAAATTTAGTTGAGATGCCAGATCTTGGAAAGGCCCTAAATCTTGAAAGCCTAGTGCTTCAAGGATGCATACAGCTCCGAAAAATCCATCCATCGATTGGTCTATTGAAAAGGCTTGCTGTTTTGAATTTGAGAAACTGCAAAAACCTAGTAAGCTTACCCAATACCATATTAGGTCTCACTTCTCTTGAATATCTGAGTGTCTCTGGCTGTTCAAAACTATACAATAATGAGTTATTAAATGAAGCAAGGAACACAGAGCATTTGAAGAAGCTTTGTTTAGTTGAAGCTCCTATGCATTCCCAATCAACATCCTCTTTCATAAAAAAAATGCTTTTGTGGCCTTTAGATTTGTTGTATTCCAGAGCAGAAAGGGACTCAGTTGGTTGTTTGTTGCCTTCCTCTTCTACTCTCCCCTCTTCCACTCTCCCTTGTTTGCGTGAACTCGACCTAAGCTTCTGTAACTTAGTCCAAATCCCTGATGCCATTGGAAAGTTAAGTTGCTTAGAAAAGTTAAATTTGAAGGGAAACAATTTTACTACACTTCCCAACCTGAAGGACCTTTTCAAACTGTATTATTTAAACTTACAGCATTGCAAGCGATTGAAATACTTGCCCGATCTCCCTTCACGAACCGACTTGCCCTCAAATATTTACATGCTTCCATACCCATATTTTCAACCCTTCTTTGGACGTTTAATAGAGGACGATGAAGATATGGCAGGATTAATCATTTTCAACTGCCCTGAATTAGTTGAGAGGGAACGTTGCACTAGCATGACTCTTTCATGGATGGTACAACTTGTTGAGGCGATCCACCAATACAAATGCCATACATCCACTGCATTCGGTCCAGATGTTGAAAGTGTAATCCCTGGAAGTGAAGTATCGAGATGGTTCAACAATCAGTTTGTGAGCATGGACAATTCAATAATCATAGATGCCTCTCCCGTTATGCATGACAAAGCTTGGGTTGGTGTTGTGTGTTGCGCAATATTCCGGAAAGGTGATGAAAGGAAAATGAAATCTCGGAGAACAAAACATTTTGACGATAAAATAATTCCAGTGGTTTTGAAAAGAGATCTATTCATGGACCTGACAGATTACATGTGGCTGTTTTATTTCTCTCGGCAAGAGTTCATTCAACTATGTAACTTTAGGGCCACACATAATATTCGTGATTTTAAATTGCAATTTACAATACCGGACGTGAGAAATTGGTGCGTGGATAATAAATACGGGACAATGTGCGAGAAATCTGTTGTGACTGAAGTGAAGAAATATGGGTATCGATGGGTATATGAGCAGGATCTACAAAAATCAAACTTAAGAATGATGCATGGCGGAAATTTGGTGGCTCGGAAGCGCAAGTTTTCAGTAATTGAAGAAAAGAAGTAG 3342 0.3935 MPSNAIIQYTSSSSHAINTYDVFVSFRGEDTRNNFTGFLFEALRRKGIDAFKDDEDLRKGESIAPELLQAIQGSRIFIVVFSKNYASSTWCLRELAEICHCVQTWPRRVIPIFYDVDPSVVRKQSGCYEEAFAEHEERLREDKEKMEEAQRWRDALTQVANLSGWDIRNKSQYVQIEEIVENIINILGLKISCLPRDELVGIESRVEELTNLLCFRASNEVRVVGISGMSGIGKTTLARALYERIFHQYDFHCFIDDVSKLYRDFSSLGVQKKLISQSLNEKNLEIYNAFEGTCLAWTRLHNARALVVLDSVDQVEQLRIFTGNRDTLLRECLGGGSRIIIVSRDEHLLRTHGVDDVYQVQPLDEKSAAQLFCRNAFKVNYILSDYEQLARDVLSNVQGHPLAIEVIGSSLFGRPVSQWKSALARLKENKSKNIMDVLRMSFDQLEEEEKEIFLDIACFLHGYDERYAKEVLNFRGFHPEYGIQVLLDKSLITKKYGKIFMHNLLMDLGRCIVREKSPKEPIKWSRLWDYQDLQKALLGDQTIENVEAIVVERNVWKFDETTTRVDGLSKIKHLKLLQLENKNISGSINHLSSELGYLTWKKYPFKCLPQSFEPNKLIELNLSESSIQRLWEGTKPLHNLKRLDLSYSENLVEMPDLGKALNLESLVLQGCIQLRKIHPSIGLLKRLAVLNLRNCKNLVSLPNTILGLTSLEYLSVSGCSKLYNNELLNEARNTEHLKKLCLVEAPMHSQSTSSFIKKMLLWPLDLLYSRAERDSVGCLLPSSSTLPSSTLPCLRELDLSFCNLVQIPDAIGKLSCLEKLNLKGNNFTTLPNLKDLFKLYYLNLQHCKRLKYLPDLPSRTDLPSNIYMLPYPYFQPFFGRLIEDDEDMAGLIIFNCPELVERERCTSMTLSWMVQLVEAIHQYKCHTSTAFGPDVESVIPGSEVSRWFNNQFVSMDNSIIIDASPVMHDKAWVGVVCCAIFRKGDERKMKSRRTKHFDDKIIPVVLKRDLFMDLTDYMWLFYFSRQEFIQLCNFRATHNIRDFKLQFTIPDVRNWCVDNKYGTMCEKSVVTEVKKYGYRWVYEQDLQKSNLRMMHGGNLVARKRKFSVIEEKK* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01469 1113 Pfam Leucine rich repeat 794 848 IPR001611 GO:0005515
Lapu11g01469 1113 Gene3D Ribonuclease Inhibitor 772 868 IPR032675 -
Lapu11g01469 1113 SMART LRR_typ_2 814 839 IPR003591 -
Lapu11g01469 1113 SMART LRR_typ_2 791 813 IPR003591 -
Lapu11g01469 1113 SUPERFAMILY L domain-like 501 858 - -
Lapu11g01469 1113 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 188 - -
Lapu11g01469 1113 Gene3D - 362 446 IPR042197 -
Lapu11g01469 1113 Coils Coil 132 152 - -
Lapu11g01469 1113 Gene3D - 17 190 IPR035897 -
Lapu11g01469 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 723 IPR044974 GO:0006952
Lapu11g01469 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 456 IPR027417 -
Lapu11g01469 1113 SMART till_3 19 162 IPR000157 GO:0007165
Lapu11g01469 1113 ProSiteProfiles Leucine-rich repeat profile. 816 837 IPR001611 GO:0005515
Lapu11g01469 1113 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 165 IPR035897 -
Lapu11g01469 1113 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Lapu11g01469 1113 Gene3D - 191 355 IPR027417 -
Lapu11g01469 1113 Pfam TIR domain 20 183 IPR000157 GO:0007165
Lapu11g01469 1113 Pfam NB-ARC domain 203 433 IPR002182 GO:0043531
Lapu11g01469 1113 Gene3D Ribonuclease Inhibitor 557 760 IPR032675 -
Lapu11g01469 1113 PRINTS Disease resistance protein signature 223 238 - -
Lapu11g01469 1113 PRINTS Disease resistance protein signature 635 651 - -
Lapu11g01469 1113 PRINTS Disease resistance protein signature 397 411 - -
Lapu11g01469 1113 PRINTS Disease resistance protein signature 299 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01469 Lapu-Chr11 17886408 17891647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01469 20 832 WRKY Transcription Factor Family AT4G12020 29.362 1.06e-82 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01469 - - pvu:PHAVU_010G055200g 1360.13