Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01461 ATGGGAATTCAAAAGCATATGGTTAACGTAAAGGCTAGCTTAGGTGTTCTTTTGGTTCTTCTTCTTGTAGCAGCAGTCAGCCCTTTGGAGAAGAAGGAAACAGAAGATGATTTTGTTAAGGAGTTACTTGATCCAGCATCTGGGTTGTTCGATGAGCACACGGCAAAGATCTTATGGAAATATTGCAGGGAAGACTTATTTCATTTAACAAAAGATGTGAGTTGTGATTTATCTGGCATTACCAATATAATCAGTTCAGAGATTCAACCATTAGCACGAGAAGAAACCCAAAAATTTATCAATGCTTACTGTCCTCAATTCAAGGAGAACATTCTTCACTGTTTGAGAAAAGATAATCTCCCATTACCTATTTCAGGAAAAGAGGATGATTCCAAGATTTGGCATGTCACTTATATGGGACCACTTTTTTCCAGATTCAGTGTTCCTGCAAAAAATTTTGGTCGTATTTTGCTCCAGCACATAACAGACCCACCTAGTCCCAGCCCTGCACCCAGTCTAACACCATTTCCTGAACCCAGTTCAGCACCATCTTCTGAACCCAGTCCAGCACCATCATCTGAACCCAGTCCAGCACCGGCACCATCACCTCGTGCTCCAGTGCCTCATCATCTTCCTGCACCACTGCAACCTTCCGCACCAACTCCTTTTTTTCCAAAATTGACACCAGCAGCTTCAGATATTTCTGCTCCTCCATCTTCTGAAATTGACAAACAGGAAAATGGTCATAGTAATAAAAAAACAGTTGTTCTTGCAGTTGTTATAACTGCATTGGTGACATTTATAGCTGCAGCACTCCTCTTTTTATGCTGGAGTCGGTATCGAAAGACTGGGCATGTTAGACTAAATGACGATAGGCCTCTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTTTTCTTTTGGAAATTCAATAAAAGGGGAGAAACTTGGGTTTCAGTCATCTAGTAATAGTTTGGTAGACAATAAGAAGTACTCGGTGCAAGAAAGTCAATCAATAGGAGCTCTTAATGCTGCTACAGGATCACCATTTGAACTGAAACCTCCTCCCGGGAGGGTGGGAAACATCCCTTCTGGAATGCCTCCTTTAAAACCTCCTCCAGGCAGGTTGAACCCTCTTCCTCCTGAGCCACCTTCATTTAGGCCTTCGAATGCTGCTGCTCCAGCGTCTACTGCTACTGTTGCTGCAGTTCCTTCTCCTGCCCCTCAAAAGCCCGCTATTAGTAACTTTCCTCCACCCCAACCGCCAATGGTTGCCAAACCTAGCCCACCTCTACCACCACCGCCAGCACTAGTTGGTTCCAGACCAGGTCCTCCTCCACCACCTCCAGTACTAGCTGTTTCCAGACCTGGTCCTCCTCCTCCACCACCCCCAGCACCAGGTGGTGCCAAATCTGGTCCTCCTCCACCGCCACCCCCAGCACCAGGTGGTGCCAAATCTGGTCCTCCTCCACCGCCACCCCCAGCACCAGGTGGTGCCAAACCTGGTCCTCGGCCACCACCTCCTCCTGTGAATGGTGTAGCTCCTCCTCGACCTCCTCCATTTGGCTCAAAGGTGCCACAGCCTTTAGCTAGTGGATCAAAAGCTACAGCTGCAGCTGATGTAGAAGGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCAGATCAATCAATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTTTAATGAAGAAATGATAGAGACGCTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTCAACGACAGAAAGAATCTTCCTCTCAAGACCAGTCACCTCAGTTTCTCCAGATCATTGACAAAAAGAAAGCTCAAAATTTATTAATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTCGTGATGCCCTTTATGAAGGACACGAGCTACCCTCAGAATTCCTTCAAACTTTGCTAAAGATGGCACCCACATCAGATGAAGAACTTAAGCTCAGACTATTTGATGGTGATCTATCTCAACTTGGTCCTGCTGACAGTTTCCTCAAAGCCCTGGTTGACATTCCATTTGCATTCAAGAGAATGGAAGCTCTGCTTTTCATGGGCTCATTTAAAGAGGAGCTTGGAACTACTATGGAGTCTTTTTCCATTTTGGAGGTTGCTTGTAAGGAACTAAGGAGTAGCCGGCTGTTCCTGAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACTTTCCGTGGTGGTGCACAAGCTTTTAAACTTGATACACTTCTGAAATTATCCGATGTAAAAGGAACAGACGGGAAGACTACACTCTTGCACTTTGTTGTCCTAGAGATTATTCGCTCTGAGGGCATAAAAGCTGTCCGAAAGTCCAAAGATAGCCAGAGTTTATCTAGTATTAAATCAGATGACCTTCAGGATAGTATTCAAGAAACAGAAGATCACTACCATGAAATCGGCCTTCAGGTTGTTTCACACTTGAGCAGTGAACTTGAGAATGTAAAAAGAGCAGCAGTTATAGATGCTGACAGCTTAACAGGAACCACTGCTAAACTTGGCCATGGTCTCGTAAAAACACGAGACTTGATAAACAAAAACATGAAGAATGTGGAGGAAGACAAGGGGTTTTGTGAGGCAGTGAAAAGTTTCGTGCAGAATGCTGAGGCTGATGTTAAGAAACTGCTGGAAGAGGAGAAGAAGATCATGGCTTTGGTGAAGAACACTGGTGATTACTTTCATGGGAATGCTGGGAAGAATGAAGGCATAAGGCTGTTCATAGTGGTACGGGACTTCTTAATAATGCTGGATAAGGTATGCAAGGAGGTGATAGACACACGGAAGAAGCAATCAAAAACACTAAAACAAGAGAATCCACGGGGACCATCTTCCTCTGAAACACGTCCACCACCTGATTTTCGTCAGCGGCTCTTTCCTGCAATTGCTGAAAGGAGAATGGATTACGTTAGTTCAGATGATGAGAGTCCATAG 3036 0.448 MGIQKHMVNVKASLGVLLVLLLVAAVSPLEKKETEDDFVKELLDPASGLFDEHTAKILWKYCREDLFHLTKDVSCDLSGITNIISSEIQPLAREETQKFINAYCPQFKENILHCLRKDNLPLPISGKEDDSKIWHVTYMGPLFSRFSVPAKNFGRILLQHITDPPSPSPAPSLTPFPEPSSAPSSEPSPAPSSEPSPAPAPSPRAPVPHHLPAPLQPSAPTPFFPKLTPAASDISAPPSSEIDKQENGHSNKKTVVLAVVITALVTFIAAALLFLCWSRYRKTGHVRLNDDRPLLSLSMSDYSVGPSSFSFGNSIKGEKLGFQSSSNSLVDNKKYSVQESQSIGALNAATGSPFELKPPPGRVGNIPSGMPPLKPPPGRLNPLPPEPPSFRPSNAAAPASTATVAAVPSPAPQKPAISNFPPPQPPMVAKPSPPLPPPPALVGSRPGPPPPPPVLAVSRPGPPPPPPPAPGGAKSGPPPPPPPAPGGAKSGPPPPPPPAPGGAKPGPRPPPPPVNGVAPPRPPPFGSKVPQPLASGSKATAAADVEGEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRQKESSSQDQSPQFLQIIDKKKAQNLLILLRALNVTMEEVRDALYEGHELPSEFLQTLLKMAPTSDEELKLRLFDGDLSQLGPADSFLKALVDIPFAFKRMEALLFMGSFKEELGTTMESFSILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAVRKSKDSQSLSSIKSDDLQDSIQETEDHYHEIGLQVVSHLSSELENVKRAAVIDADSLTGTTAKLGHGLVKTRDLINKNMKNVEEDKGFCEAVKSFVQNAEADVKKLLEEEKKIMALVKNTGDYFHGNAGKNEGIRLFIVVRDFLIMLDKVCKEVIDTRKKQSKTLKQENPRGPSSSETRPPPDFRQRLFPAIAERRMDYVSSDDESP* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01461 1011 Pfam Formin Homology 2 Domain 548 951 IPR015425 -
Lapu11g01461 1011 Coils Coil 893 920 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 218 239 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 163 175 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 367 392 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 403 415 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 205 217 - -
Lapu11g01461 1011 PRINTS Proline rich extensin signature 183 199 - -
Lapu11g01461 1011 SMART it6_source 546 966 IPR015425 -
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 164 224 - -
Lapu11g01461 1011 ProSiteProfiles Formin homology-2 (FH2) domain profile. 546 977 IPR015425 -
Lapu11g01461 1011 Gene3D Formin, FH2 domain 551 981 IPR042201 -
Lapu11g01461 1011 PANTHER FORMIN-RELATED 238 999 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 364 392 - -
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 348 551 - -
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 963 991 - -
Lapu11g01461 1011 SUPERFAMILY Formin homology 2 domain (FH2 domain) 616 976 - -
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 414 529 - -
Lapu11g01461 1011 MobiDBLite consensus disorder prediction 159 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01461 Lapu-Chr11 17708139 17715812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01461 550 1002 FH2 protein (formin) Gene Family AT5G54650 66.376 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01461 - - gmx:100793413 859.366