Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01451 ATGAGCGCTGACGCTCTATCAAAAATGAGTCATCTGCAGTTGCTCGAGCTTGAGAGAGTGAATTTTTCTGGTAACCTCAGTCATCTTTCCAGTGACTTAGGATATCTTAAGTGGGATAAATATCCTTTCCAGTGTTTGCCTCCTAGTTTTCAACCGGACAAACTTCTTGAGTTGTCCCTCACTAACAGTAACGTCGAAAAACTATGGGAAGGCACAAAGCCTCTACTCAACTTGAGACTTTTGGATCTCTCTGGTTCCAAAAATCTGATCAAGATGCCAGATTTAGGCGAGGCCCCAAATCTTGAATGTCTATGTCTTGGACAATGTATTAAACTCAAACAGATTGATCCATCTGTCGGTCTCTTAAGAAAGCTAACATTTTTGGATTTGCAAGATTGCAGAAGTCTAATCAAGTTACCACACGTTGGAGGGGCCCTAAATCTTTCATGGCTAAATCTGGAAGGATGTATAAAAATAATGCAGATAGATCCATCCATTGGTCATCTAAGAGAACTTTTTCTTTTGAATTTGACAAACTGCAAAAGTGTGTTAAGCTTACCCAACAGCATATTGGGCCTCAATTCTCTCAGAATACTGAGTATCTCGGGCTGCTCAAAACTGTATGATATCCGGTTATTAGATGAACCAAGGGATGAGTATTTGAAGAAGCATTGTATAGGTGAAGCTCCTATTCATTCCCAATCAATGTTCTCATTCATCAAAATGTGGCCTTTATCTTTGTTACATTCCGGATCACATAAAGATTCAGTATCTCCTTTGTTGCCTTCCTTGCTTGGCTTCCCATATATGCTTCAACTTAATCTAAGTTACTGCAATTTACTTCAAATCCCAGATGCTATGAGAAATTTACGTCTCTTAGAAGCTTTAGATTTAAGTGGAAACTGTTTTGTTACACTGCCCAGCCTCAAGGACCTTTCCAAACTGTTGCATTTAAACTTGCAACATTGCAAACAGTTAAAATATTTGTGTGAACTCCCTTCAAGAACTGAGTTGTCATCACTACTCAACTCATTACCATCGTTTTTGACTAGTACAACTTGTATAAGAGACGCAGGATTATATATTTACAATTGCCCAGAATTAGTTGAGATAGAACGCTGCACAAGCATGGGATTTTCGTGGATGATAAAACTTATTGAGGCGAACCACCGATACAATTATTCAACTGGTGTCGACCAAAGATGGCCTCGTGTTATTTCAAGTATCATTCCAGGAAGTGAAATACCAAAGTGGTTCTACAATCAGCATGTGGGTACAGGCAGTATAATAACCATAGAGACATCTACCCTTATGCAGCAAGTTGGCAACTTTTCTTGTTGTGTAGTATTCTCAGCTCGTCCAAGAGGAACAAATTTAAAGATTAGTCTGGAAAGAAGAGTAAATTGTGTTCTTGATGCTGTTATTCCGATGGATCTAGATGAAGATGTTGTCACAGACAAAATAGATCATATGGGCTTATTCTATTTCAGTGAATCCACTCACGAATTTTCAAAATTGGAAGTTCATGTATCAGACTGGCATGGTTTTGCTGTTGAGGTGAAGAAATACGGATATCGTTGGGATACTGACTTAATAATGAAGCACTGGGGAAATTTGTCAGCTCAGAAACGCAAGTTTTCTGCAATTGAAGAAAACAAGTAG 1662 0.3863 MSADALSKMSHLQLLELERVNFSGNLSHLSSDLGYLKWDKYPFQCLPPSFQPDKLLELSLTNSNVEKLWEGTKPLLNLRLLDLSGSKNLIKMPDLGEAPNLECLCLGQCIKLKQIDPSVGLLRKLTFLDLQDCRSLIKLPHVGGALNLSWLNLEGCIKIMQIDPSIGHLRELFLLNLTNCKSVLSLPNSILGLNSLRILSISGCSKLYDIRLLDEPRDEYLKKHCIGEAPIHSQSMFSFIKMWPLSLLHSGSHKDSVSPLLPSLLGFPYMLQLNLSYCNLLQIPDAMRNLRLLEALDLSGNCFVTLPSLKDLSKLLHLNLQHCKQLKYLCELPSRTELSSLLNSLPSFLTSTTCIRDAGLYIYNCPELVEIERCTSMGFSWMIKLIEANHRYNYSTGVDQRWPRVISSIIPGSEIPKWFYNQHVGTGSIITIETSTLMQQVGNFSCCVVFSARPRGTNLKISLERRVNCVLDAVIPMDLDEDVVTDKIDHMGLFYFSESTHEFSKLEVHVSDWHGFAVEVKKYGYRWDTDLIMKHWGNLSAQKRKFSAIEENK* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01451 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 204 IPR044974 GO:0006952
Lapu11g01451 553 Gene3D Ribonuclease Inhibitor 2 144 IPR032675 -
Lapu11g01451 553 Gene3D Ribonuclease Inhibitor 145 225 IPR032675 -
Lapu11g01451 553 Gene3D Ribonuclease Inhibitor 238 379 IPR032675 -
Lapu11g01451 553 ProSiteProfiles Leucine-rich repeat profile. 292 313 IPR001611 GO:0005515
Lapu11g01451 553 SUPERFAMILY L domain-like 4 397 - -
Lapu11g01451 553 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Lapu11g01451 553 Pfam C-JID domain 410 501 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01451 Lapu-Chr11 17526745 17528671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01451 4 207 WRKY Transcription Factor Family AT4G12020 35.000 1.99e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01451 - - gmx:100814717 476.092