Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01428 ATGGCTTTCAATAGTGATGACATTGTAGGAGATTACAAAGAGTTAACACATGGAGTGTTAAAATATGCTGGGAACCTACCACTAGCAATTAAAGTACTAGGCTCATTTTTGTTCGGTAAAAGCGTGTCAGAGTGGAGAAGTGCCTTGGTTAGATTGAAAGAAAATCCCAACAAAGATATTTTGGATGTGCTTCAAATTAGTTATGATGGACTACAGGATTTGGAAAAGCAAATATTTCTGGACATTGCTTGTTTCTTCAGCGGGTATAAAGAGTCGTATGTGAAGAAAGTTCTTGATTGTCGTGGATTTCATTCTGAAATTGGAATAAGAGTCCTCGTTGACAAATCACTCATAGACAATTCACATGGATTCATTGAAATGCATGATTTGTTGAAAATTTTGGGCAGAAAAATTGTGAAAGGCAATTCAACCCAGGAGCCAGGCAAGTGGAGCAGGTTGTGGTTACATGAAGATTTGTACAATATGTCCAAGGCAAAGGAAACAACGAACACTGAAGCGATTGTTTTAGACATGTCAAGAGAGATGGAAGAATTGCTGACTGATGCAGAAGAGCTGTCCAAAATGAGTAACCTTAGGTTGCTCATACTCCATGATTATCTGCCAAATTTAAGAGCTTTGGATCTCACAGCCTCCAAGAATCTTATTAAGGTTCCAGACTTCAGTGGGGTTCCAAATCTTGAGTGGATAATTCTTGACAGATGCACAAAACTTTCGAGGATCCATCCATCAGTTGGTCTTCTAAGAAAACTTGTTTTCTTGAGTTTGAAAAACTGCATAAATCTAGTAAGTCTACCCAGCAATATATTGGGTCTGAATTCTCTTGAATGTCTGAATGTCTCTGGCTGTCCAAAAGTCTTTAGTAACCAGCTGTTAGACAAACCAATATATGAGCCTTTTAAGACGCTTGATATCAGGGAATCTGCCATGCAATCCCAATCAACATCCTCTTCCATCTTCAAGAAACTCATTATAACTTTCAAGTTCTCCACCTATAGAGGGTATAAAACTTCAGGTGGTTCTTTGTTGCCTTCCTTGCCCAGCTTCTTCTGTATGCGTGACCTTGATCTAAGTTTCTGCAATCTAAGTCAAATCCCTGATGCTATTGGATCCATGCATTCCTTAGAGTCCTTAAATTTAGGGGGAAACAACTTTGTTAGCCTCCCTTCGAGCATCAACAACCTTTCCAAACTCATACATTTAAACTTGGAGCATTGCAAGCGATTAAGATTTTTTCCTGAGATGCCATCACCCACTGCTTTGCCTGCTATAAAAGAAACCTACAGTTTTGCTCGTTATGGAAGGGGATTATTTATTTTCAATTGTCCTGAAATAGTTGATATTGAAGGTTGTCACAGAATGACTTTTGCATGGTTGTTACAAATCCTTCAGGTGCTTGCTGATATGTTTGTTGAATAA 1437 0.3855 MAFNSDDIVGDYKELTHGVLKYAGNLPLAIKVLGSFLFGKSVSEWRSALVRLKENPNKDILDVLQISYDGLQDLEKQIFLDIACFFSGYKESYVKKVLDCRGFHSEIGIRVLVDKSLIDNSHGFIEMHDLLKILGRKIVKGNSTQEPGKWSRLWLHEDLYNMSKAKETTNTEAIVLDMSREMEELLTDAEELSKMSNLRLLILHDYLPNLRALDLTASKNLIKVPDFSGVPNLEWIILDRCTKLSRIHPSVGLLRKLVFLSLKNCINLVSLPSNILGLNSLECLNVSGCPKVFSNQLLDKPIYEPFKTLDIRESAMQSQSTSSSIFKKLIITFKFSTYRGYKTSGGSLLPSLPSFFCMRDLDLSFCNLSQIPDAIGSMHSLESLNLGGNNFVSLPSSINNLSKLIHLNLEHCKRLRFFPEMPSPTALPAIKETYSFARYGRGLFIFNCPEIVDIEGCHRMTFAWLLQILQVLADMFVE* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01428 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 82 IPR027417 -
Lapu11g01428 478 PRINTS Disease resistance protein signature 23 37 - -
Lapu11g01428 478 PRINTS Disease resistance protein signature 205 221 - -
Lapu11g01428 478 Pfam Leucine rich repeat 359 413 IPR001611 GO:0005515
Lapu11g01428 478 Gene3D Ribonuclease Inhibitor 155 301 IPR032675 -
Lapu11g01428 478 Gene3D Ribonuclease Inhibitor 307 466 IPR032675 -
Lapu11g01428 478 Gene3D - 2 72 IPR042197 -
Lapu11g01428 478 Coils Coil 175 195 - -
Lapu11g01428 478 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 319 425 IPR044974 GO:0006952
Lapu11g01428 478 SUPERFAMILY "Winged helix" DNA-binding domain 59 161 IPR036390 -
Lapu11g01428 478 ProSiteProfiles Leucine-rich repeat profile. 380 401 IPR001611 GO:0005515
Lapu11g01428 478 SUPERFAMILY L domain-like 144 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01428 Lapu-Chr11 17024969 17026872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01428 12 407 WRKY Transcription Factor Family AT4G12020 30.380 1.22e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01428 - - gmx:100820213 691.419