Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01424 ATGGCTTCAGAGAAGAAACTATCGAACCCTATGAGGGAGATAAAGGTACAGAAGCTCGTCCTCAATATATCTGTTGGCGAGAGTGGAGATCGCCTCACCAGAGCTGCAAAGGTGTTGGAACAACTGAGTGGCCAAACCCCAGTGTTCTCCAAAGAGGTCTGTGGAAAACTGGAGATGAGGATTCTGATATCCCGTGAGTTTATGGCAAGGTACACTGTTCGTTCCTTTGGGATTAGAAGAAACGAGAAGATTGCTTGTTATGTCACTGTTAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTCAGAAGGAACTTCAGCGATACTGGCTGCTTTGGCTTTGGCATTCAGGAGCATATTGATTTGGGAATCAAGTACGATCCTTCAACCGGTATTTATGGAATGGATTTCTTTGTTGTTTTGGAGCGTCCTGGCTACCGTGTGGGTCGTCGCAGAAGGTGCAAGTCCCGTGTTGGAATTCAGCACCGTGTCACAAAGGAGGATGCTATGAAGTGGTTCCAGGTGAAATATGAGGGAGTGATCCTTAACAAGTCTCAGGCAATTGTTTAG 597 0.459 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKEVCGKLEMRILISREFMARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIV* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01424 198 Gene3D - 2 194 IPR022803 -
Lapu11g01424 198 Pfam Ribosomal protein L5 9 51 IPR031310 -
Lapu11g01424 198 FunFam 60S ribosomal protein L11 2 191 - -
Lapu11g01424 198 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 60 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lapu11g01424 198 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 64 189 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lapu11g01424 198 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 2 193 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lapu11g01424 198 Pfam ribosomal L5P family C-terminus 83 181 IPR031309 -
Lapu11g01424 198 SUPERFAMILY RL5-like 8 190 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01424 Lapu-Chr11 16981488 16983879 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01424 1 198 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 86.869 1.17e-124 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01424 K02868 - gmx:100818410 331.643