Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01410 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGGGGAGGGAGCCTAGGGAGCGGAGGCGGATGCCGAGGGTTATGAGTGTCCCAGGGTTTCTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAACCCCTCGACAGTTACTACGGATAGAATGATCATTGTGGCTAACCAGTTACCATTGAAGGCAAAGCGAAGAGAGGACAACAAAGGGTGGTCTTTCAGTTGGAATGAAGATTCATTACTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGTTCCTTACGTGTTGACATTGATCCAGCAGAACAGGATGAAGTGTCTCAGAATTTATTGGATAAATTCAAATGTGTTCCGACTTTTCTACCTGCAGACGTTTTGTCAAAATTTTATGATGGTTTTTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTACCATTTTCAACAGACAAAAGCCACCGATTTGATCGCACTTTGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAGAAGGTAGTTGAAATAATAAACCCTGAGGATGATTACATTTGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTATAAGAAGACGATTTAACCGGGTTAAAATGGGATTTTTCCTGCACAGCCCCTTTCCATCATCAGAGATTTACAGGACTCTTCCTATCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATCGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGCTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCTAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCGGTTGGGATTCACATGGGTCGAATTGAGTCTGTTATGAGAATGGCAGTTGAGGAGACTAAGGTAAAGGAGCTCAAAGAGCAATTCGAAGGAAAAACAATCTTACTTGGTGTTGATGACATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCGATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCTAGAGGTAAAGGGATACATCTGGAGGAGATACATGCTGAAATACAAGAAAGCTGCACCAGAATCAACAGAGTGTTTGGGCGACCTGGTTATGAACCTATTGTTTTTATTGATAGGGCAGTATCCATTGCAGAAAAAGTTGCGTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATACATTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATCATCCAATGTTAGTGACAGAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGGTGCTCTCCATCACTTAGTGGGGCAATCCGTGTCAATCCGTGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCCATCTCAATGAGTGATGGCGAGAAGCAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTACTGGTCACGTAGTTATTTGCAAGACATGGAGCGGGCTTGCACAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTTTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAGGAGTAGGGCCATTTTGTTAGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAAGCAAGGAGGTCTTGTCTATTATGGAATCACTTAGTGCAGACCCCAGAAATGTTGTTTTCATTGTTAGTGGAAGGGGGAGAAATAGCTTAAGTGACTGGTTTGCTCCCTGCGAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGTGCCACAATGGAGAATGGGAAATTTGTGGTAAGTCCTCCGACTTTGGCTGGATGCAGATAGCTGAACCTGTGATGAACCTATATACAGAGGCAACTGATGGTTCCTCAATTGAAAGAAAAGAAAGTGCTTTAGTCTGGCAGTACCGTGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGCCAGTTTATTGTTGAAGTAAAACCACAGGATGTGAGCAAAGGTTTGGTTGCCGAAAGGATATTTTCGTCAATGGATGGGAAAGGCAAGCCGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGGAATATTCTTGCCACCAATGCTTCTGTGTTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCAAAGTATTATCTGGATGATACAACTGAGGTAACAAGCATGCTAGAATCTTTGGCCGAGGAATCAGATTCTTCACCCTGCATAGAAGAAACTGGGGATTCCTCTTCTTGGAGGCAAGTGTGA 2592 0.4244 MMSRSYTNLLDLASGNFPAMGGREPRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDEVSQNLLDKFKCVPTFLPADVLSKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPIREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMAVEETKVKELKEQFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIHAEIQESCTRINRVFGRPGYEPIVFIDRAVSIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISGSESSSNVSDRKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSYLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRARSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPRNVVFIVSGRGRNSLSDWFAPCEKLGIAAEHGYFLRWCHNGEWEICGKSSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMDGKGKPADFVLCVGDDRSDEDMFEIVSSAISRNILATNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIEETGDSSSWRQV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01410 863 FunFam Trehalose-6-phosphate synthase 2 677 756 - -
Lapu11g01410 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 843 IPR001830 GO:0003824|GO:0005992
Lapu11g01410 863 MobiDBLite consensus disorder prediction 840 863 - -
Lapu11g01410 863 NCBIfam HAD-IIB family hydrolase 596 800 IPR006379 -
Lapu11g01410 863 Pfam Trehalose-phosphatase 597 831 IPR003337 GO:0003824|GO:0005992
Lapu11g01410 863 Pfam Glycosyltransferase family 20 64 547 IPR001830 GO:0003824|GO:0005992
Lapu11g01410 863 FunFam Alpha,alpha-trehalose-phosphate synthase 318 531 - -
Lapu11g01410 863 Gene3D Glycogen Phosphorylase B; 318 531 - -
Lapu11g01410 863 NCBIfam trehalose-phosphatase 591 842 IPR003337 GO:0003824|GO:0005992
Lapu11g01410 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 57 316 - -
Lapu11g01410 863 SUPERFAMILY HAD-like 594 842 IPR036412 -
Lapu11g01410 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 551 - -
Lapu11g01410 863 CDD HAD_TPP 595 834 - -
Lapu11g01410 863 Gene3D Glycogen Phosphorylase B; 57 317 - -
Lapu11g01410 863 Gene3D - 722 852 IPR023214 -
Lapu11g01410 863 Gene3D - 593 694 IPR023214 -
Lapu11g01410 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 593 710 - -
Lapu11g01410 863 CDD GT20_TPS 64 547 IPR001830 GO:0003824|GO:0005992
Lapu11g01410 863 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 723 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01410 Lapu-Chr11 16567959 16573392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01410 1 848 Trehalose Biosynthesis Gene Families AT1G06410 78.184 0.0 1388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01410 K16055 - gmx:100800847 1620.91