LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01406	ATGCTCATTTCTTCCAAAATCAACTTCACAACTCACAAAACTCTTATCAGCCACAACCTATTTCTTCCTATAGAGATGTCTTCCCTTAACAACCCTTTCTTTGTTACAGTTTCTATTCTTTCTCTCTTAGCCTTTTCTTGCAATGCACAACTTTCTCCCACCTTTTATGCCAACACTTGCCCCAACCTTCAAACCATAGTGCGCAGTGCAATGAGACAAGCTATTGCCAGAGAAGCTAGGCTTGGTGCCTCCATTCTTCGCTTGTTCTTTCATGATTGCTTTGTAAATGGGTGTGATGGATCAATTCTATTGGACGACACTGCCACATTCACGGGAGAGAAAAATGCAGCACCTAACAGAAATTCAGCTAGGGGATTCGAAGTTATTGATACCATTAAAACCAACGTTGAAGCTGCTTGCAATGCCACTGTGTCTTGTGCTGATATTCTAGCCCTTGCCACAAGAGATGGAGTAGTGCTGCTAGGAGGACCCTCATGGACAGTTCCTCTAGGAAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAGCCAAATCCCTTCACCATTCTCGGACCTCGCCACCCTCTCATCCATGTTTGCAGCCAAAGGTCTAACAGCAAGAGACCTAACCGTGCTCTCAGGAGGACACACAATAGGCCAAGCTCAGTGCCAATTCTTCAGGACTCGCATATACAACGAAACCAACATTGATGCCAACTTTGCCACCACAAGAAAGGCCAACTGCCCTACCTCTGGAGGGAACTCCAACCTGGCCCCTCTTGAAACCCTCACCCCTACCCGTTTTGACAACAATTACTACACTGACCTTGTGAACCAACGTGGCCTTCTTCACTCTGACCAAGTGCTTTTCAATGGTGGGTCTCAAGATGCCCTTGTGAGGACCTATAGTGGCAATAATGCTGCCTTTTTCAGGGACTTTGCTGCTGCCATGGTGAAGATGGGCAACATTAGTCCTCTCACTGGGACCAGTGGGGAGATCAGAAGGAATTGCAGGCTGGTGAATTGA	1032	0.47	MLISSKINFTTHKTLISHNLFLPIEMSSLNNPFFVTVSILSLLAFSCNAQLSPTFYANTCPNLQTIVRSAMRQAIAREARLGASILRLFFHDCFVNGCDGSILLDDTATFTGEKNAAPNRNSARGFEVIDTIKTNVEAACNATVSCADILALATRDGVVLLGGPSWTVPLGRRDARTASQSAANSQIPSPFSDLATLSSMFAAKGLTARDLTVLSGGHTIGQAQCQFFRTRIYNETNIDANFATTRKANCPTSGGNSNLAPLETLTPTRFDNNYYTDLVNQRGLLHSDQVLFNGGSQDALVRTYSGNNAAFFRDFAAAMVKMGNISPLTGTSGEIRRNCRLVN*	344

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01406	343	PRINTS	Haem peroxidase superfamily signature	82	96	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Haem peroxidase superfamily signature	144	161	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Haem peroxidase superfamily signature	210	225	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Haem peroxidase superfamily signature	263	278	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Haem peroxidase superfamily signature	162	174	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	SUPERFAMILY	Heme-dependent peroxidases	50	343	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	CDD	secretory_peroxidase	50	342	IPR033905	GO:0004601\|GO:0042744
	Lapu11g01406	343	PRINTS	Plant peroxidase signature	124	137	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Plant peroxidase signature	60	79	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Lapu11g01406	343	PRINTS	Plant peroxidase signature	84	104	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01406	Lapu-Chr11	16527664	16530703	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01406	45	343	Peroxidase	AT5G05340	65.116	7.67e-145	410

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01406	K00430		-	gmx:100810392	574.318

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