Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01406 ATGCTCATTTCTTCCAAAATCAACTTCACAACTCACAAAACTCTTATCAGCCACAACCTATTTCTTCCTATAGAGATGTCTTCCCTTAACAACCCTTTCTTTGTTACAGTTTCTATTCTTTCTCTCTTAGCCTTTTCTTGCAATGCACAACTTTCTCCCACCTTTTATGCCAACACTTGCCCCAACCTTCAAACCATAGTGCGCAGTGCAATGAGACAAGCTATTGCCAGAGAAGCTAGGCTTGGTGCCTCCATTCTTCGCTTGTTCTTTCATGATTGCTTTGTAAATGGGTGTGATGGATCAATTCTATTGGACGACACTGCCACATTCACGGGAGAGAAAAATGCAGCACCTAACAGAAATTCAGCTAGGGGATTCGAAGTTATTGATACCATTAAAACCAACGTTGAAGCTGCTTGCAATGCCACTGTGTCTTGTGCTGATATTCTAGCCCTTGCCACAAGAGATGGAGTAGTGCTGCTAGGAGGACCCTCATGGACAGTTCCTCTAGGAAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAGCCAAATCCCTTCACCATTCTCGGACCTCGCCACCCTCTCATCCATGTTTGCAGCCAAAGGTCTAACAGCAAGAGACCTAACCGTGCTCTCAGGAGGACACACAATAGGCCAAGCTCAGTGCCAATTCTTCAGGACTCGCATATACAACGAAACCAACATTGATGCCAACTTTGCCACCACAAGAAAGGCCAACTGCCCTACCTCTGGAGGGAACTCCAACCTGGCCCCTCTTGAAACCCTCACCCCTACCCGTTTTGACAACAATTACTACACTGACCTTGTGAACCAACGTGGCCTTCTTCACTCTGACCAAGTGCTTTTCAATGGTGGGTCTCAAGATGCCCTTGTGAGGACCTATAGTGGCAATAATGCTGCCTTTTTCAGGGACTTTGCTGCTGCCATGGTGAAGATGGGCAACATTAGTCCTCTCACTGGGACCAGTGGGGAGATCAGAAGGAATTGCAGGCTGGTGAATTGA 1032 0.47 MLISSKINFTTHKTLISHNLFLPIEMSSLNNPFFVTVSILSLLAFSCNAQLSPTFYANTCPNLQTIVRSAMRQAIAREARLGASILRLFFHDCFVNGCDGSILLDDTATFTGEKNAAPNRNSARGFEVIDTIKTNVEAACNATVSCADILALATRDGVVLLGGPSWTVPLGRRDARTASQSAANSQIPSPFSDLATLSSMFAAKGLTARDLTVLSGGHTIGQAQCQFFRTRIYNETNIDANFATTRKANCPTSGGNSNLAPLETLTPTRFDNNYYTDLVNQRGLLHSDQVLFNGGSQDALVRTYSGNNAAFFRDFAAAMVKMGNISPLTGTSGEIRRNCRLVN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01406 343 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 SUPERFAMILY Heme-dependent peroxidases 50 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 CDD secretory_peroxidase 50 342 IPR033905 GO:0004601|GO:0042744
Lapu11g01406 343 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Lapu11g01406 343 FunFam Peroxidase 54 193 - -
Lapu11g01406 343 FunFam Peroxidase 188 322 - -
Lapu11g01406 343 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601
Lapu11g01406 343 ProSiteProfiles Plant heme peroxidase family profile. 50 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 Pfam Peroxidase 67 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 Gene3D - 54 340 - -
Lapu11g01406 343 PANTHER PEROXIDASE 72-RELATED 47 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu11g01406 343 Gene3D Peroxidase, domain 2 188 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01406 Lapu-Chr11 16527664 16530703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01406 45 343 Peroxidase AT5G05340 65.116 7.67e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01406 K00430 - gmx:100810392 574.318