Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01394 ATGGGTTTTCGTCTACCTGGTATGAGAAAGGCACTATTTGCAGCAAATCAAGCATCTTCAAAAGCGGTGGATGCACCAAAGGGGTATCTTGCAGTCTATGTTGGGGAGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCAACCTCTATTCCAGGACTTGCTGAGTCAAGGTGAAGAAGAATTTGGATATTATCATTCCATGGGTGGTCTCACAATTCCTTGCGACGAAGATGTCTTCCGACACATAACTTCTTGCTTGAATTCAAAATAA 279 0.4194 MGFRLPGMRKALFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPISYLNQPLFQDLLSQGEEEFGYYHSMGGLTIPCDEDVFRHITSCLNSK* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01394 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
Lapu11g01394 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01394 Lapu-Chr11 16248437 16248715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01394 17 91 Calmodulin-binding Proteins AT3G43120 46.667 9.78e-22 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01394 K14488 - gmx:100820621 166.007