Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01387 ATGGGTTTCCGTTTACCTGTTATTCGACGGGCATCATTCACAGCTTCAAAATCTGTGGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGCAACAAAAGCGGTTTGTGATTCCCATATCCTACTTGAACCAATCTTCATTCCAAGGCTTGTTGAGTCAATCTGAAGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCTGCGAAGAAGTCTTCCAACGTATAATTTCTTGCTTGAATTGA 261 0.4291 MGFRLPVIRRASFTASKSVEVPKGYLAVYVGEQQKRFVIPISYLNQSSFQGLLSQSEEEFGYDHPMGGLTIPCCEEVFQRIISCLN* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01387 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 84 IPR003676 GO:0009733
Lapu11g01387 86 Pfam Auxin responsive protein 15 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01387 Lapu-Chr11 16217956 16218218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01387 20 85 Calmodulin-binding Proteins AT3G43120 53.030 5.68e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01387 K14488 - gmx:106798972 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01387 11 16217956 16218218 Lapu11g01387 11 16217956 16218218 ECH