Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01386 ATGGGTTTTCGTTTCCCTGGATTCAGAAAGGCAGTATTTGCTGAAAATCAAGCATCTCCAAAAGCAAGGGATGCCCCGAAGGGCCATCTTGCGGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCAGTATCATACTTGAACCAACCTTCATTCCAAGAACTGTTGAGTCAAGCTGAGGAAGAGCTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAAAAGTCTTCCAGCATATAACTTCTTGCTTGAATGGTCAATAA 279 0.4409 MGFRFPGFRKAVFAENQASPKARDAPKGHLAVYVGEKMKRFVIPVSYLNQPSFQELLSQAEEELGYDHPMGGLTIPCSEKVFQHITSCLNGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01386 92 Pfam Auxin responsive protein 17 89 IPR003676 GO:0009733
Lapu11g01386 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01386 Lapu-Chr11 16209682 16209960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01386 24 92 Calmodulin-binding Proteins AT3G43120 47.826 1.15e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01386 K14488 - gmx:100820621 167.162