LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01365	ATGGCTCAATTGCCACCAAAAATACCAAACGTGACACCCAATTGGCCAGACTTTACTTCTCCTCACCAAAAGATGCCTTCCCTCAAAACCGTGGCACCAAACATGTCAAACCAAAACCCTTCATGGGTGGACGAGTTTCTAGACTTCTCCGCTGCTAGGCGCGGCGCTCATAGGCGGACGGTGAGTGACTCCACCGCCTTCCTGGAGGCACCATTGCTTGACCATCATTGTAAGAGTCGTGGTAGTGAAGGTGGTGACAATGATAACGAATTCGAGAGGTTTGATGATGAACAATTCATGTCCATGTTCGGTGATGAGGCCTCAGGGAATAATAATAATGATGATAATGATAACAATAATACCATGGCACACACGTTTTCCTCCTCCAACCCTTCTACACCCTCTGATCACAACAGCATCAACGATGAGAAGGAGATGAACAAGGAAAAGGAGGAGGAGGAGGAAGAAGAAGAGAAGAAGCAAGTGAAGAATGAGTCAGATGAGGATAAAAGCCAATGCAAGCAAGAAATCACACAAACCCCCGATGATAGTAATAACAGTAACGCAAATGCAACAACTTGTTCCAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCGGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCTGAGCTTGAACGAAGTGTGACTTCATTACAGGCCGAAGTTTCAGTATTGTCTCCACGAGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGCTTTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATCTTCAAAGATGCACATCAGGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAAAACATAAAGAAGATGGACATTGCTGCAGGGTCACCATCCCAATCCCCATTACCATCTCCAAAACCACGATGTGATACACACATTGAAAAGGAACAGCTTATCAATGTATGA	1008	0.4474	MAQLPPKIPNVTPNWPDFTSPHQKMPSLKTVAPNMSNQNPSWVDEFLDFSAARRGAHRRTVSDSTAFLEAPLLDHHCKSRGSEGGDNDNEFERFDDEQFMSMFGDEASGNNNNDDNDNNNTMAHTFSSSNPSTPSDHNSINDEKEMNKEKEEEEEEEEKKQVKNESDEDKSQCKQEITQTPDDSNNSNANATTCSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDIAAGSPSQSPLPSPKPRCDTHIEKEQLINV*	336

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01365	335	Coils	Coil	282	302	-	-
	Lapu11g01365	335	PANTHER	BASIC LEUCINE ZIPPER 34	1	322	-	-
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	305	335	-	-
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	104	137	-	-
	Lapu11g01365	335	Coils	Coil	137	172	-	-
	Lapu11g01365	335	Gene3D	-	202	273	-	-
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	177	198	-	-
	Lapu11g01365	335	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	201	253	IPR004827	GO:0003700\|GO:0006355
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	13	38	-	-
	Lapu11g01365	335	FunFam	Basic leucine zipper 61	202	275	-	-
	Lapu11g01365	335	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	206	221	IPR004827	GO:0003700\|GO:0006355
	Lapu11g01365	335	Pfam	bZIP transcription factor	203	247	IPR004827	GO:0003700\|GO:0006355
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	1	38	-	-
	Lapu11g01365	335	SMART	brlzneu	199	263	IPR004827	GO:0003700\|GO:0006355
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	138	176	-	-
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	73	198	-	-
	Lapu11g01365	335	SUPERFAMILY	Leucine zipper domain	203	257	IPR046347	GO:0003700\|GO:0006355
	Lapu11g01365	335	CDD	bZIP_plant_RF2	204	254	IPR044759	GO:0003700\|GO:0006355
	Lapu11g01365	335	MobiDBLite	consensus disorder prediction	73	100	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01365	Lapu-Chr11	15973603	15977345	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01365	1	280	bZIP Transcription Factor Family	AT3G58120	59.197	1.62e-101	298

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lapu11g01365		bZIP_1	4.1e-09	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01365	-		-	gmx:778128	494.197