Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01363 ATGCAAAGAAATAACAGTGGAATGCATCCAGCTTGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAAAATTGTATATTGGCACCTTACTTTCCATCAAACAGAAGCCGTGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATAACCAAGTTGGTGAAGAATGCTAGAGAGGATGATAGAAGAAGAGTTGTGGATTCACTGACATGGGAAGCATGCTGCAGGCAAAGGGACCCTATACATGGCCCTTATGGAGAGTACACAAAAGTTTACAATGAGTACAAGAAAGTGTTGGATGAACTTAAGAGATTCAGAAGCCAACACCAAATGCTGCAGTTTTCCTCCTCTCTAGGGTTAAAGTCTGTGCAAGATTTGATTGGTTGCAAAGGGGAAGACAAAGCAGAAGTTGATAATGCATTGCAGTATCTTCATGGCAAAAAGAATGGTATTATTGATTCTGATATTTATAATACTTATTGTTCCAATTATTTGCAAGAGTTTCACAATATGAGGCCTGAAGTTGTCATACCCTTTCAGCACCACTCTCAACCATACTACATTACAGGTCATAAAATGATAGAAATTGCTTTATTGTCTTCAAATCACTAA 618 0.3883 MQRNNSGMHPACAACKHQRKKCSENCILAPYFPSNRSREFHAVHKVFGVSNITKLVKNAREDDRRRVVDSLTWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELKRFRSQHQMLQFSSSLGLKSVQDLIGCKGEDKAEVDNALQYLHGKKNGIIDSDIYNTYCSNYLQEFHNMRPEVVIPFQHHSQPYYITGHKMIEIALLSSNH* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01363 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 132 - -
Lapu11g01363 205 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Lapu11g01363 205 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01363 Lapu-Chr11 15949954 15950645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01363 9 109 AS2 family AT1G06280 56.436 2.52e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu11g01363 LOB 8.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01363 - - vra:106780610 339.732