LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01357	ATGATGAGAGAAAGTTCCAAGGGCAAGTGTGGATCCTCTTCTGTTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAGCAATCTTCAGTGTGCAAGAAAAGAGGGCAGGGGTAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGCTGCTCCGCGAGTGGAAGGCGGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAGTGAACTTGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCATTAACAAAACCTGGGCCATTGAAGACTGAGCTCCAAACAAGTAACATTAGTGACAACAATTTTCAGTTTTTTCAGGAGAAGCATTTTGATGATAACCAACCTCTAGGTCATAATTTTGAAGGCTCTGCTTCAACACTGTACAACAACAATGCTTTTAATAATTCAGATATGGCACAGTTGAATTTTCATCCATTTGGTTTAAATCAAGATATGAATCACAACCCAGTAGGTCACAACTCTGATTTGATTGGTCAGTTGGATTTATATCAGGACCTCAGGCACAACACAGAAATAAAACACTCAGAGTCGACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAATTCTTTGGAACTGAGGATACTGTGCAGCATGGAGAGAATATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGCTTCAGACCCGCTCAAGGGGTAGAATGGTGCCAAAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAGGGTCTTCCTGGCATGACTCCAATTTTACGACCTGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTTCTGTTCTTGCTAAGGCGCAGGGAAAGGAAGTGGGCATCCCTAGTTGTGAAGGCGCTGCGTCAACTAAATCCCCCTGGAATGCTCCAGAGTTCTTTGATCTTACGTTTCTTGAGGGTGAAGCTGTTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAATAGAAAACAAAGATCACTTCCAGATTACAGCGGACGCGGTTGGCATGAATCAAGGAAGCAGGTGATGAAAGAACATGGGGGACAAAAGAGGTCTTATTACATGGACCCTCAGCCACTTAGTTATCTGGAGTGGCATTTGTATGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAACTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCATCTGATGATGGAGTACCCATCAAGGGAAAAGCAAATGCCAAGTCTGAGAATGATGAATCTCCAGAAAAGTAA	1452	0.427	MMRESSKGKCGSSSVQSMKEKEKHLVDKIQGIFSNLQCARKEGRGNDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNISDNNFQFFQEKHFDDNQPLGHNFEGSASTLYNNNAFNNSDMAQLNFHPFGLNQDMNHNPVGHNSDLIGQLDLYQDLRHNTEIKHSESTQFSLEGFDCSQFFGTEDTVQHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFASVLAKAQGKEVGIPSCEGAASTKSPWNAPEFFDLTFLEGEAVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGQLTAAVLSSDDGVPIKGKANAKSENDESPEK*	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01357	483	PANTHER	TRANSCRIPTION FACTOR VOZ1	2	477	IPR039277	GO:0006355\|GO:0048578
	Lapu11g01357	483	MobiDBLite	consensus disorder prediction	457	483	-	-
	Lapu11g01357	483	MobiDBLite	consensus disorder prediction	361	391	-	-
	Lapu11g01357	483	MobiDBLite	consensus disorder prediction	370	391	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01357	Lapu-Chr11	15863641	15867459	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01357	1	456	VOZ-9 Transcription Factor Family	AT1G28520	52.070	2.78e-156	451

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Lapu11g01357		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01357	-		-	vra:106755121	943.725