Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01354 ATGAGTTTTGATAATGAAGATCATTCTTCCAAACTACTTCGAGACCAAACCCACATATTTAACCAAACTTTTGGTTTCATAAACTCTATGTCCCTTAAATGTGCACTTGATTTGTGCATACCTGATGTTATCCACAAGTATGGCCAACCTATGCCACTCTCACAACTCATTGCTTCACTTCCAATTCACCCTTCCAAGACTTGCTTTGTTTCCCGCTTGATGCAAATTTTGGTCCATTCTGGTTTCTTCTCTCAACACAATGTCACTGATAACAAGCAAGAAGTGAGTTATGTGCTTACTGATGCATCTAGACTACTCCTTAAGGACCATCCCTTTAGTATGACATGTTTGCCACAAGTCATACTTGACCCAATTTTGGTCAATCCATGGTTTCAATTCTCCACTTGGTTCACAAATGATGACCCTACACCATTTCACACACAACATGGGATGACTTTCTGGGATTATGCTAGCCGTGAGCCCAAACTCAACCACCTTTTCAATGATGCCATGACTAATGACACTCGATTGATTTCCAGTGTGGTGATCGAGAAGTGCAAGGGAGTGTTTGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACTATGGCTAAGGCCATTGCCAAGTCATTTCCACACTTGAAGTGCACTGTTTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACTGATAACATAAAATATGTTGGAGGGGACATGTTTGAAGCAATCCCTTCTGCTGATTCCATCATGTTGAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAGAATTCTGAAGAAATGTAAGGAGGCAATCCAAAAGAAAGAAAAAGGAAAAGTGATTATCATAGACGTGGTGATAGGAAACGTGAAAGGAGATGGTGAATTGGATCAAACAAAGCTTTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAAGAGAGAAATGAAAAAGATTGGGCTAAGTTGTTTTTTTCTGCAGGGTTTAATCACTACAAGATAACTCCAGTTCTAGGTTTCAAGTCTCTCATAGAGGTGTATCCATAA 1071 0.4006 MSFDNEDHSSKLLRDQTHIFNQTFGFINSMSLKCALDLCIPDVIHKYGQPMPLSQLIASLPIHPSKTCFVSRLMQILVHSGFFSQHNVTDNKQEVSYVLTDASRLLLKDHPFSMTCLPQVILDPILVNPWFQFSTWFTNDDPTPFHTQHGMTFWDYASREPKLNHLFNDAMTNDTRLISSVVIEKCKGVFEGLESLVDVGGGTGTMAKAIAKSFPHLKCTVFDLPHVVHGLQGTDNIKYVGGDMFEAIPSADSIMLKTIMHNWNDEECLRILKKCKEAIQKKEKGKVIIIDVVIGNVKGDGELDQTKLYYDMEMMVLVTGKERNEKDWAKLFFSAGFNHYKITPVLGFKSLIEVYP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01354 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Lapu11g01354 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Lapu11g01354 356 FunFam O-methyltransferase ZRP4 108 356 - -
Lapu11g01354 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Lapu11g01354 356 Gene3D - 2 106 IPR036388 -
Lapu11g01354 356 PANTHER O-METHYLTRANSFERASE 18 341 IPR016461 GO:0008168
Lapu11g01354 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 355 IPR029063 -
Lapu11g01354 356 CDD AdoMet_MTases 196 294 - -
Lapu11g01354 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Lapu11g01354 356 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Lapu11g01354 356 Pfam O-methyltransferase domain 132 338 IPR001077 GO:0008171
Lapu11g01354 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01354 Lapu-Chr11 15836641 15838118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01354 30 342 Monolignol Biosynthesis Gene Families AT5G54160 33.125 3.50e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01354 - K16040 gmx:100793263 615.15