Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01353 ATGTCCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATCCACAACTATGGCCAACCTATGCCACTCTCACTACTCACTGCTTCATTACCAATTCATCCCTCCAAGACTTCCTTCATTTCACGCTTGATGCAAATTTTGATCCATTCTGGTTTTTTCTCTCAACACAGTGCCACAGAAACTGAGCAAGAAGTGAGCTATGTGCTGACTGATGCATCCACACTTCTCCTCAAGGGTCACCCCTTGAGTATGACATCTTTTTTGCAAATGGCACTTGATCCATTTTTTATTAATCCATTCCACAAACTCTCTACTTGGTTCACAAATGAAGACACTACACCTTTTCACACACAAAATGGGATGGGATTCTGGGATTTTGCTGGGTGTGAGCCTAAGTTCAGTCACTCTTTCAATGAGGCCATGGATAGTGACAGTCGATTGATTTCCAGTGTGGTGATGGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACTATGGCTAAGGCCATTGCCAAGTCATTTCCACACTTGAAGTGCACTGTTTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACTGATAACATAAAATATGTTGGAGGGGACATGTTTGAAGCAATCCCTTCTGCTGATTCCATCATGTTGAAGACTATAATGCATGACTGGAACGATGGGGAATGCTTGAGAATTTTGAAGACATGTAAAGAGGCAATCCAAAAGAAAGAAAACGGAAAAGTGATTATCATAGACGTGGTGATAGGCAACGTGAAAGGAGACGATGAATTGGAACAAACAAAGCTCTACTATGATATGGAGATGATGGTTTTGGTTGGTGGAAAAGAGAGAAATGAAAAAGATTGGGCTAAGTTGTTTTTCTCTGCAGGGTTTAATCACTACAAGATAACACCAGTTCTAGGTTTCAAGTCTCTCATAGAGGTGTATCCATAG 984 0.4157 MSLKCAIDLCIPDVIHNYGQPMPLSLLTASLPIHPSKTSFISRLMQILIHSGFFSQHSATETEQEVSYVLTDASTLLLKGHPLSMTSFLQMALDPFFINPFHKLSTWFTNEDTTPFHTQNGMGFWDFAGCEPKFSHSFNEAMDSDSRLISSVVMEKCKGVLEGLESLVDVGGGTGTMAKAIAKSFPHLKCTVFDLPHVVHGLQGTDNIKYVGGDMFEAIPSADSIMLKTIMHDWNDGECLRILKTCKEAIQKKENGKVIIIDVVIGNVKGDDELEQTKLYYDMEMMVLVGGKERNEKDWAKLFFSAGFNHYKITPVLGFKSLIEVYP* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01353 327 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
Lapu11g01353 327 PIRSF O-mtase 1 327 IPR016461 GO:0008168
Lapu11g01353 327 Gene3D - 1 77 IPR036388 -
Lapu11g01353 327 CDD AdoMet_MTases 167 265 - -
Lapu11g01353 327 FunFam O-methyltransferase ZRP4 79 327 - -
Lapu11g01353 327 PANTHER O-METHYLTRANSFERASE 1 312 IPR016461 GO:0008168
Lapu11g01353 327 Gene3D Vaccinia Virus protein VP39 78 327 IPR029063 -
Lapu11g01353 327 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 327 IPR016461 GO:0008168
Lapu11g01353 327 Pfam Dimerisation domain 1 48 IPR012967 GO:0046983
Lapu11g01353 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 326 IPR029063 -
Lapu11g01353 327 Pfam O-methyltransferase domain 101 309 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01353 Lapu-Chr11 15818050 15819249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01353 1 313 Monolignol Biosynthesis Gene Families AT5G54160 31.562 8.05e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01353 - K16040 gmx:100793263 528.48