Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01352 ATGCTGGCGCCGTGGAGTGAGGTTGCTACGATCCAGTTGGTAGTTCAGATAATCATGGATTATGATAAGGAACACCATTCTGCAAAACTAATTCGAGCTCATAACCACATTCTAAATGAAACATTCAGTTTTGTTAAATCCATGTCCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATCCACAACTATGGCCAACCTATGCCACTCTCACTACTCACTGCTTCATTACCAATTCATCCCTCCAAGACTTCCTTCATTTCACGCTTGATGCAAATTTTGATCCATTCTGGTTTTTTCTCTCAACACAGTGCCACAGAAAATGAGCAAGAAGTGAGCTACGTGCTAACTGATGCATCCACACTACTCCTCAAGGATCACCCCCTGAGTATGACAGCTCTTTTGCAAGTCGCACTTGATCCACTTAGTATTCATCCATTACATAAACTCTCTACTTGGTTCACAAATGAAGACACTACAGCTTTTCACACTCAAAATGGGGTGGGAGTTTGGGATTTTACGGCGATTGAGCCTAAATTCAATCACTTCTTCAATGAGGGCATGGCTTGTGACACTCGATTAGTTTCCAGTGTGGTGATTGAGAATTGCAAGGAAGTGTTCGAAGGGTTAGAGTCATTGGTTGATGTTGGGGGAGGAACAGGAACTATGGCCAAGGCTATTGCCAGTTCATTTCCACAACTGAAGTGTATTGTATTTGATCTGCCACGTGTTGTTGCTGACTTGCAAGGAACTGAGAACCTAAAATATGTTGGAGGGGACATGTTTGAAGCAATTCCTTCTGCTGATTCCATAATGTTGAAGTGTATATTGCACAACTGGAACGATGAGGAATGCTTAAAAATACTAAAGAACTGTAAAGAGGCCATCACAAATCAAGTTAAAGGGAAAGTGTTAATCATAGACATGGTGATGGGGATTGAGAAGGCAAATAGAGAATTCGATGAGACAAAACTCTTCTATGATATACAAATGATGTCATTATTCGCAGGGAAGGAGAGAAATGAGAAAGAATGGGCCACGTTGATATATTCCGCAGGTTTCAGTAACTATAAGATAATTCCAGCTCTGGGTGTGAGGTCGATCATTGAAGTTTATCTGTAG 1125 0.4107 MLAPWSEVATIQLVVQIIMDYDKEHHSAKLIRAHNHILNETFSFVKSMSLKCAIDLCIPDVIHNYGQPMPLSLLTASLPIHPSKTSFISRLMQILIHSGFFSQHSATENEQEVSYVLTDASTLLLKDHPLSMTALLQVALDPLSIHPLHKLSTWFTNEDTTAFHTQNGVGVWDFTAIEPKFNHFFNEGMACDTRLVSSVVIENCKEVFEGLESLVDVGGGTGTMAKAIASSFPQLKCIVFDLPRVVADLQGTENLKYVGGDMFEAIPSADSIMLKCILHNWNDEECLKILKNCKEAITNQVKGKVLIIDMVMGIEKANREFDETKLFYDIQMMSLFAGKERNEKEWATLIYSAGFSNYKIIPALGVRSIIEVYL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01352 374 Pfam O-methyltransferase domain 150 356 IPR001077 GO:0008171
Lapu11g01352 374 Pfam Dimerisation domain 48 95 IPR012967 GO:0046983
Lapu11g01352 374 Gene3D - 20 124 IPR036388 -
Lapu11g01352 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 373 IPR029063 -
Lapu11g01352 374 PANTHER O-METHYLTRANSFERASE 37 359 IPR016461 GO:0008168
Lapu11g01352 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 374 IPR016461 GO:0008168
Lapu11g01352 374 PIRSF O-mtase 16 374 IPR016461 GO:0008168
Lapu11g01352 374 Gene3D Vaccinia Virus protein VP39 125 373 IPR029063 -
Lapu11g01352 374 SUPERFAMILY "Winged helix" DNA-binding domain 27 129 IPR036390 -
Lapu11g01352 374 FunFam Coniferyl alcohol 9-O-methyltransferase 20 124 - -
Lapu11g01352 374 FunFam O-methyltransferase ZRP4 126 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01352 Lapu-Chr11 15809614 15811453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01352 45 369 Monolignol Biosynthesis Gene Families AT5G54160 31.250 1.50e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01352 - K16040 gmx:100793263 523.472