Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01351 ACCAAATTACATATGGAATCTCACAATGAAGAGCATGCTACAAAATTGCTTCAAGCTCAAACCCACGTTTGGAATCATATTTCCAAATTCATAAACTCCATGACCCTTAAATGTGCAGTTGAATTGAGCATACCAGATATCATACACGACTATGGCCAACCTATGCCAATCTCAAAACTCATTGCTTCACTACCAATCCACCCTTCCAAGACTTGCTTCATCTACCGCTTGATGAGAATTTTGACTCATTCTGGTTTTTTTTCTTTACACAATGATACCGAAAATGAGCTTGAAGTGAGGTATGTGCTAACTGATGTATCTAAAATACTCCTTAAGGACCATCCCTGTAGTATCAAAGGTTTGGTTCAACTCGTAGTTAATCCAGTTACGCTCAATCCATGGTTTCAATTCTCTACTTGGTTCACAAATGAAGACCCTACACCGTTTCACACTGAACATGGTATAGGATTTTGGGATTTTGCTGGACGTGAGCCTAAATTCAATCACCTCTTCAATGATATCATGGCTATTGACACTCGATTGGTTTCTAGTGTGGTGATTGAGAAGGGTAAGAGAGTGTTCGAGGGAATAGAATCATTGGTTGATGTTGGAGGAGGAACAGGGACAATGGCCAAGGTCGTTGCTGAGTCCTTCCCACAACTAAAGTGCATTGTATTTGATCTGCCACATGTTGTTGCAGACTTGCAAGGAACTGAGAACATAAAATATGTTGGAGGGGACATGTTTGAAGCAATTCCGCATGCTGATTCCATTATGTTGAAGTGGATAATGCATGACTGGAACGACGAGGAATGTGTGAAAATACTGAATAATTGTAAGGAGGCAATACCTAGCAAGGGAAAGGTTATTATCATAGACATGGTGATCGAGGATAAGAAGGAAGATGGTGAATTGACTGAGACACAGCTTTTCTTTGATATGGAGATGATGATGCTTTACTCAGGAAAAGAAAGAAATGAGAAAGAGTGGACCAGCCTCATTTTCTCTGCCGGCTTCACTAACTACAAGATTACTTCTAATTTAGGTTTATTTTCTATAATTGAGGTTTATCCCTAG 1077 0.3965 TKLHMESHNEEHATKLLQAQTHVWNHISKFINSMTLKCAVELSIPDIIHDYGQPMPISKLIASLPIHPSKTCFIYRLMRILTHSGFFSLHNDTENELEVRYVLTDVSKILLKDHPCSIKGLVQLVVNPVTLNPWFQFSTWFTNEDPTPFHTEHGIGFWDFAGREPKFNHLFNDIMAIDTRLVSSVVIEKGKRVFEGIESLVDVGGGTGTMAKVVAESFPQLKCIVFDLPHVVADLQGTENIKYVGGDMFEAIPHADSIMLKWIMHDWNDEECVKILNNCKEAIPSKGKVIIIDMVIEDKKEDGELTETQLFFDMEMMMLYSGKERNEKEWTSLIFSAGFTNYKITSNLGLFSIIEVYP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01351 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 358 IPR016461 GO:0008168
Lapu11g01351 358 Pfam O-methyltransferase domain 134 339 IPR001077 GO:0008171
Lapu11g01351 358 Gene3D - 5 110 IPR036388 -
Lapu11g01351 358 CDD AdoMet_MTases 200 296 - -
Lapu11g01351 358 FunFam O-methyltransferase ZRP4 112 358 - -
Lapu11g01351 358 Gene3D Vaccinia Virus protein VP39 111 358 IPR029063 -
Lapu11g01351 358 SUPERFAMILY "Winged helix" DNA-binding domain 14 115 IPR036390 -
Lapu11g01351 358 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Lapu11g01351 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 357 IPR029063 -
Lapu11g01351 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Lapu11g01351 358 PANTHER O-METHYLTRANSFERASE 16 343 IPR016461 GO:0008168
Lapu11g01351 358 FunFam Coniferyl alcohol 9-O-methyltransferase 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01351 Lapu-Chr11 15778655 15780290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01351 34 356 Monolignol Biosynthesis Gene Families AT5G54160 34.347 9.12e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01351 - K16040 gmx:100807238 525.783