Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01349 ATGGAAACCCAGGGCGAAGAGCATGCTACAAAATTGCTTCGAGCTCAAACCCATGTTTGGAATCATACTTTCAAATACATAAACTCTTTGTCCCTCAAATGTGCCATTGACTTGAGCATACCAGATATCATACACAAGTATGGCCAACCTATGCCACTCTCAAAACTCATAGCTTCACTACCAGTCCCTCCTTCCAAGACCTACTTTATCAACCAGTTGATGAGAATTTTGACTCATTCTGGTTTCTTCTCTGAACACCGTGTCACTGAAAATGAGGGTGAAGTGATGTATGTGCTAACTGATGCATCTACATTACTCCTAAAGGACCACCACTTGAGCATGACACCTTTGTTACAAGTCGTAGTTAGTCCACTTTATATTAATCCATGGTATCAAGTCTCTACTTGGTTCACAACTGAAGACCCTACACCATTTCACACTGAAAATGGAATGTCATTCTGGGATTTTGCTGGGTGTAACCCTAAATTCAATCACCTTTTCAACGATTTCATGGCTAGTGACACTCAATGGGTTTCTGGTGAGGTGATTGAGAAGTGCAAGGGGGTGTTTAATGGATCAAAGTCATTCGTTGATGTTGGAGGGGGTACAGGGACTATGGCTAAGGAAATTGCTAGGTCATTCCCACAACTAAAATGCATTGTATTGGATCTGCCACATGTTGTTGCTGAGTTGCAAGGAACTGAGAACGTAGAATATGTTGGAGGGAATATGTTTGAAGCAATTCCTTCTGCCGATTCCATTATGTTGAAGCGGGTATTGCATAACTGGAAGGATGAGGAATGTGTGAAAATACTGAATAATTGCAAGGAGGCAATAGGTAGCCATGGAAGGGTTATTATCATAGACTTCGTGATGGAGAATAAGAAGGAAGATAGTGAATTCACTGAGACGCAGTTTTTCTTTGACATGCAGATGATGATGTTGTTCACTGGAAAAGAGAGAAATGAGAAAGAGTGGGCCAGCCTCATTTTCTCTGCTGGTTTCAGTAAATACAAGATTACTCCTGCTCTTTGTTTAACTTCTATCATTGAGGTTTATCCCTAG 1065 0.4103 METQGEEHATKLLRAQTHVWNHTFKYINSLSLKCAIDLSIPDIIHKYGQPMPLSKLIASLPVPPSKTYFINQLMRILTHSGFFSEHRVTENEGEVMYVLTDASTLLLKDHHLSMTPLLQVVVSPLYINPWYQVSTWFTTEDPTPFHTENGMSFWDFAGCNPKFNHLFNDFMASDTQWVSGEVIEKCKGVFNGSKSFVDVGGGTGTMAKEIARSFPQLKCIVLDLPHVVAELQGTENVEYVGGNMFEAIPSADSIMLKRVLHNWKDEECVKILNNCKEAIGSHGRVIIIDFVMENKKEDSEFTETQFFFDMQMMMLFTGKERNEKEWASLIFSAGFSKYKITPALCLTSIIEVYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01349 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Lapu11g01349 354 PANTHER O-METHYLTRANSFERASE 13 339 IPR016461 GO:0008168
Lapu11g01349 354 CDD AdoMet_MTases 196 292 - -
Lapu11g01349 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Lapu11g01349 354 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
Lapu11g01349 354 Gene3D - 2 106 IPR036388 -
Lapu11g01349 354 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Lapu11g01349 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Lapu11g01349 354 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Lapu11g01349 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Lapu11g01349 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Lapu11g01349 354 FunFam O-methyltransferase ZRP4 108 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01349 Lapu-Chr11 15746762 15748355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01349 30 340 Monolignol Biosynthesis Gene Families AT5G54160 32.278 6.88e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01349 - K16040 gmx:100793263 501.516