Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01342 ATGACTCAGTGCAGGGACCCTGAAAACAATCAGCATAATATCATAGTGGAGGGACGAAAGGATAGCTTAATTAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAACAGGGAGGTGGAATTCATGACTTACCTGGACTTCCTGCTGGGGTGAAGTTTGATCCTACAGATCAAGAGATTCTTGAGCATTTAGAAGCGAAGGTGCGATCTGATATTCATAAGCTTCATCCGCTGATTGATGAGTTCATTCCCACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGTCTGATCCGCCATTTCTTTCACAGGCCTTCCAAGGCATACACCACAGGAACAAGGAAAAGGAGAAAGGTGCATTCAGATGAAGATGGCAGTGAGACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTTGTACTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTCATGCACCAATACCACCTTGGCAGTGATGAAGAAGAAAAAGAAGGGGAGTTAGTGGTATCTAAAGTTTTCTACCAAACACAGCCTAGACAATGTAGTTCCCTCATGAAAGACTCATCAGTTCCTGGGAAACATATGAAGGGTCAAAGTGTGCATGAGGTGATCAATAACAAAAACAACAACAATGGTTTTGTTGAGTACTACCATTCAAATTACATCTCATTTGATCAAGGTGGTCAACATAGACCTAGCACTGCTCAAGTAATTTCCCATTTTCCTGTCCATGAAGGTGCTCCTTTCAACATTCCTTGA 858 0.4231 MTQCRDPENNQHNIIVEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCSSLMKDSSVPGKHMKGQSVHEVINNKNNNNGFVEYYHSNYISFDQGGQHRPSTAQVISHFPVHEGAPFNIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01342 285 MobiDBLite consensus disorder prediction 128 147 - -
Lapu11g01342 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Lapu11g01342 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Lapu11g01342 285 FunFam NAC domain-containing protein 73 58 212 - -
Lapu11g01342 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 22 229 IPR044799 GO:0003700
Lapu11g01342 285 MobiDBLite consensus disorder prediction 123 148 - -
Lapu11g01342 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Lapu11g01342 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01342 Lapu-Chr11 15602565 15605230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01342 25 223 NAC Transcription Factor Family AT4G28500 79.000 2.27e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu11g01342 NAM 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01342 - - gmx:100797459 570.852