Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01341 ATGTTCTTGTCTTTTCTTTTCTTCCTCTTCCTTCTCTCTCCTCCGCGACTCTCTCTCTCTCTAACCCAAGATGGCCTTTTCCTCCTCGAGGCAAGCCGCCGCCTCTCCGACCCCAACAACTCCCTCTCCTCCTGGAACCCCGCCTCCTCCACCCCCTGCCGGTGGAGGGGCATCACTTGCAACAATCATTCCGCCGCCGTCACCGCGGTCGATCTCTCCTCCTCCCTTCTCTCTGGCCCCTTCCCCACCGCCCTCTGCCGCCTCCCCTCCCTCTCCTCCCTCAACCTCTCCTACAACCTCATAAACTCCACCCTCTCCGACGTCTCTCTCTGCCGCACCCTCCTTCACCTCGACCTCTCCCAAAACGCCCTCGTGGGCCCCATCGACCCCCTCGCCGCACTCACCTCCCTCCGCCACCTAGACCTCTCTGGCAACAACCTCACCGGCGAAATTTCGGAGAGCTTAGCCGCCCTACACCACCTCGAAACGCTCAACCTCGTTGGCAATCTACTCACCGGCGCCATTCCGGCTTCACTCGGTAACCTCACTTCGCTCAAGCGGCTTCAACTCGCGTACAACCCGTTCGAGCCGAGTCCCTTGCCGAAAGAACTCGGTAACCTCAGAAACCTCGAAACGCTTTTTCTCGCTGTGTGCAACCTCCACGGTCCCATTCCAGACACCTTCAGCAATCTCGTTAACTTGACAAACCTCGACTTGTCTCAGAACAGAATCACCGGTCACATTCCCCAATGGTTCACTCGTTTCTCGCGCGTGACCCAAATTGAGCTTTACAAAAACTCACTCTCCGGGGAGCTACCCAGAGGAATGTCGAAGATGAGGAGTTTAAAATTATTCGACGCTTCGGGGAACGAGCTGACTGGGACAATTCCGACCGAGTTGTGCGAGTTGCCACTCAAGTCATTGAATTTATATGAGAACAAACTCGAAGGGTTTCTGCCGGGGGCCATTGCGCGTTCTCCGAACCTCTATGAACTAAAACTTTTCAGTAACAGACTCGTTGGAACGTTGCCGAGTGATTTGGGGAGTAACTCACCGTTGAACCATATCGACCTTTCGTTTAACCGGTTTTCCGGTGCCATTCCGGCGAACATTTGCCGGCGGGGGAAGCTTGAGCAGCTAATTTTGATATACAATTCGTTGTCGGGTGAAATTCCCGAGAGTCTCGGGAAATGCAAGAGTTTAACGAGGGTTCGATTAAGGAACAATAATCTCTCGGGAAGTGTTCCGGAAGGGGTTTGGAGTTTGCCCCGTTTGCATTTGCTTGAGCTTTTGGAAAATTCTCTTTCTGGGCACATTTCTAAGGCCATTTCTGGCTCTTCCAGCTTGTCAAATTTGTTGCTTTCTAATAACCGGTTTTCTGGGTCGATTCCTGAGGAAATTGGGTTATTGGACAATCTTGTGGAGTTTGCTGCTAGTAATAATAATCTCTCGGGTCGGATTCCGAGGAGCATGGTGAAGTTGAAGCAGTTGGTTAATCTTGACCTTAGTTCTAATAAACTTTCCGGTGATCTTAATTTTGGTGGAATTGGCTACTTAAGTAAGGTCACTGACCTTAATTTGTCACATAATAGGTTTGATGGAAATGTTCCAAGTGAATTAGGAAATTTGCCTGTGCTCAATTATCTTGATCTTTCATGGAACAATTTCTCTGGGGAGATTCCGTTGCAGTTGCAAAATTTGAGGCTATCGGGCCTGAATTTGTCTTACAACCAGCTTTCTGGGGATATTCCTCCTCTTTATGCGAATGCTAAGTATAAGACGAGTTTCATAGGGAATCCTGGCCTCTGTAGTCATCTCCCTGGGCTTTGGAATTGTCATGGTAGGAATAAGAATTGGAGGTATGTGTGGATTTTGTGGTCCATTTTTGTGCTTGCTGGAGTTGTGTTCATTATAGGGGTGGCATGGTTTTACTTTAGGTATAGGAAGGTGAAGAAGTTGAAGAAGGAGTTATGCACTTTGAAGTGGAAGTCGTTTCACAAGCTGCGGTTCAGTGGGTTTGAGGTTGCTAAGTTGCTGAATGAGGCCAATGTGATAGGAAGGGGAGCATCTGGGAAGGTGTACAAGGTGGTGCTCAGCAATGGTGAGGTGGTAGCAGTGAAAAAATTGAGTGGAGCACCTACGAAAGTGAATGAAAATGTTGGTTCTAGAAAAGATGAATTTGATGCTGAAGTAGAAACTCTGGGGAGGATTAGGCACAGGAATATTTTGAGGTTGTGGTGTTGCTGCAACAGTGGGGACAACAAGCTATTGGTTTTTGAATACATGCCAAATGGGAGCTTGGGTGATTTGTTAAAGGGTAGCAAGAAGAGCTTGTTGAATTGGCCTACTAGGTATAAAATTGCCGTTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGATTGTGTCCCACCCATTGTCCACAGGGATGTGAAATCTAACAATATATTGGTGGATGAGGAGTTTGTGGCAAAAATTGCAGATTTTGGAGTTGCGAAAATGGTTACAAGAGCCAGCCAAGGAACAGAATCAATGTCTGTTATTGCAGGATCATATGGCTACATTGCACCAGAATACGCATACACTCTGAGGGTGAATGAGAAGTGTGACATATACAGCTTTGGAGTGGTGATTTTGGAGTTGGTAACTGGGAGACCCCCCATTGATCCAGAGTATGGTGAGAATGATTTGGTGAAATGGGTGTCCTCTGCATTGGAACATGAAGGGCTGAATCATGTGATTGATCCTACATTGGACTCCAAATACAGGGAAGAAATAAGCAAGGTATTGAGTGTGGGGTTGCATTGCACCAGTTCCATCCCAATAACTCGCCCCTCAATGAGAAACGTGGTTAAAATGCTTCACGAGGTAACAGCAGTTCCCAAATGCACAAGTGTAGACGATGCAAATGACCCTAGTTACAACGAAGGCACCTCTCATTGTATCAGTGAAGAGTAG 2958 0.4784 MFLSFLFFLFLLSPPRLSLSLTQDGLFLLEASRRLSDPNNSLSSWNPASSTPCRWRGITCNNHSAAVTAVDLSSSLLSGPFPTALCRLPSLSSLNLSYNLINSTLSDVSLCRTLLHLDLSQNALVGPIDPLAALTSLRHLDLSGNNLTGEISESLAALHHLETLNLVGNLLTGAIPASLGNLTSLKRLQLAYNPFEPSPLPKELGNLRNLETLFLAVCNLHGPIPDTFSNLVNLTNLDLSQNRITGHIPQWFTRFSRVTQIELYKNSLSGELPRGMSKMRSLKLFDASGNELTGTIPTELCELPLKSLNLYENKLEGFLPGAIARSPNLYELKLFSNRLVGTLPSDLGSNSPLNHIDLSFNRFSGAIPANICRRGKLEQLILIYNSLSGEIPESLGKCKSLTRVRLRNNNLSGSVPEGVWSLPRLHLLELLENSLSGHISKAISGSSSLSNLLLSNNRFSGSIPEEIGLLDNLVEFAASNNNLSGRIPRSMVKLKQLVNLDLSSNKLSGDLNFGGIGYLSKVTDLNLSHNRFDGNVPSELGNLPVLNYLDLSWNNFSGEIPLQLQNLRLSGLNLSYNQLSGDIPPLYANAKYKTSFIGNPGLCSHLPGLWNCHGRNKNWRYVWILWSIFVLAGVVFIIGVAWFYFRYRKVKKLKKELCTLKWKSFHKLRFSGFEVAKLLNEANVIGRGASGKVYKVVLSNGEVVAVKKLSGAPTKVNENVGSRKDEFDAEVETLGRIRHRNILRLWCCCNSGDNKLLVFEYMPNGSLGDLLKGSKKSLLNWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILVDEEFVAKIADFGVAKMVTRASQGTESMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVILELVTGRPPIDPEYGENDLVKWVSSALEHEGLNHVIDPTLDSKYREEISKVLSVGLHCTSSIPITRPSMRNVVKMLHEVTAVPKCTSVDDANDPSYNEGTSHCISEE* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01341 985 SMART LRR_typ_2 182 207 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 158 181 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 231 254 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 134 157 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 519 543 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 88 111 IPR003591 -
Lapu11g01341 985 SMART LRR_typ_2 279 303 IPR003591 -
Lapu11g01341 985 SMART serkin_6 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01341 985 Gene3D Phosphorylase Kinase; domain 1 646 761 - -
Lapu11g01341 985 Gene3D Transferase(Phosphotransferase) domain 1 762 974 - -
Lapu11g01341 985 SMART LRR_sd22_2 158 184 - -
Lapu11g01341 985 SMART LRR_sd22_2 134 157 - -
Lapu11g01341 985 SMART LRR_sd22_2 494 527 - -
Lapu11g01341 985 SMART LRR_sd22_2 231 260 - -
Lapu11g01341 985 SUPERFAMILY RNI-like 272 589 - -
Lapu11g01341 985 Gene3D Ribonuclease Inhibitor 275 614 IPR032675 -
Lapu11g01341 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 956 - -
Lapu11g01341 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lapu11g01341 985 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 971 - -
Lapu11g01341 985 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Lapu11g01341 985 FunFam Receptor-like protein kinase HSL1 304 611 - -
Lapu11g01341 985 Gene3D Ribonuclease Inhibitor 22 172 IPR032675 -
Lapu11g01341 985 ProSiteProfiles Protein kinase domain profile. 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01341 985 FunFam Leucine-rich repeat receptor-like protein kinase 21 177 - -
Lapu11g01341 985 Pfam Protein kinase domain 681 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01341 985 SUPERFAMILY Protein kinase-like (PK-like) 679 954 IPR011009 -
Lapu11g01341 985 SUPERFAMILY L domain-like 44 304 - -
Lapu11g01341 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 206 299 - -
Lapu11g01341 985 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Lapu11g01341 985 PRINTS Leucine-rich repeat signature 494 507 - -
Lapu11g01341 985 PRINTS Leucine-rich repeat signature 137 150 - -
Lapu11g01341 985 ProSiteProfiles Leucine-rich repeat profile. 136 159 IPR001611 GO:0005515
Lapu11g01341 985 Gene3D Ribonuclease Inhibitor 173 274 IPR032675 -
Lapu11g01341 985 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Lapu11g01341 985 Pfam Leucine rich repeat 136 194 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01341 Lapu-Chr11 15577279 15580806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01341 19 979 Receptor kinase-like Gene Family AT1G28440 56.895 0.0 1082
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu11g01341 Pkinase 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01341 - - gmx:100796415 1478.38