Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01337 ATGCTTGCGGTGGCACCTTTGAGGAGCATCAAAGATGAAAAAAACCAAGGAGAGATGGAGGGTTTCTCGATGGCAACAGCAGCGACAACAACATCAGATGATGTTGACTTTGGTGACCTTTCTGAAGGGAACTTGTTGGAGAGCATCAACTTCGACGACCTCTTCGTCGGCATCGACGTTGATGGAGATGTCTTGCCGGACTTGGAGATGTTTGGTGAGTTTTCCGTCAGCGCCGGTGAAGAGTCGTCGGAGATGAACTCATCAGCAGAAAACAGCAAGGAGGAGAATGATCAAACTTGTGCTATCACAGCTTTAAAGAAGGAAGAGGAAGATAAAACTTCCTGTGCAGCTTCAGGTCAAGACTTGGGGTCAAAACTAGGAGAGGAGACAGTGAGCAAGAGTGGTGAATCCGAGGTGGTGAATCCTGCTCCAAAGGAAGGTGGAAAAGGAAGAAAATCTTCATCGGCTCAATTGAAGAGTAATAGTAATAGTAATAATCATCCTCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGACGATTTGTGCAAGCTGTGGAACAGCTAGGAGTGGATAAGGCCGTTCCTTCAAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGTCATAACATTGCCAGCCACCTTCAAAAATATAGATCTCATAGGAAACACCTGCTGGCTCGTGAGGCTGAAGCAGCAAGTTGGAGTCAAAGGAGGCACATGTATGGTGTTGGTGGAAGTGGAGGGAAGAGAGATGGAAGTCCATGGCTAGCACCAACCATGGGATTCCCTCCTCCAATGACCACAATGCACCATTTTAGACCTCTGCACGTATGGGGGCACCCCCCCATGGACCCCTTCTTCATGCACATGTGGCCCAAACATCTTCCACCTTCACCACCACTCTCATGGCCATCACCTGCACCACCCCAAGACCCTTCATTTTGGCACCAACGGGCTCCAAATGCACTAATAGCAGGAACAGCTTGTTTCCCTCAACCTCTGACACCAACGAGTTTTGGAAGTCACCCTGTCCCTGGCATCCCACGCCATGCCATGTACAAAGCAGATCACAGCATTGGCATCCATGGTCCCCGTCCTCTATTAGATTTTCATCCGTCAAAAGAGTGCATAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCCTTACCTCTTGGACTGAAGGCACCAGCAATTGATAGTGTGATGAGTGAATTACAGAGACAAGGGATTCCAAAGATTCCACCCTCTAGTGCTTGA 1287 0.4817 MLAVAPLRSIKDEKNQGEMEGFSMATAATTTSDDVDFGDLSEGNLLESINFDDLFVGIDVDGDVLPDLEMFGEFSVSAGEESSEMNSSAENSKEENDQTCAITALKKEEEDKTSCAASGQDLGSKLGEETVSKSGESEVVNPAPKEGGKGRKSSSAQLKSNSNSNNHPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRHMYGVGGSGGKRDGSPWLAPTMGFPPPMTTMHHFRPLHVWGHPPMDPFFMHMWPKHLPPSPPLSWPSPAPPQDPSFWHQRAPNALIAGTACFPQPLTPTSFGSHPVPGIPRHAMYKADHSIGIHGPRPLLDFHPSKECIDAAIGDVLSKPWLPLPLGLKAPAIDSVMSELQRQGIPKIPPSSA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01337 428 Pfam Myb-like DNA-binding domain 176 225 IPR001005 -
Lapu11g01337 428 Gene3D - 170 231 - -
Lapu11g01337 428 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 427 IPR044825 GO:0003700|GO:0045893
Lapu11g01337 428 NCBIfam myb-like DNA-binding domain, SHAQKYF class 173 227 IPR006447 GO:0003677
Lapu11g01337 428 MobiDBLite consensus disorder prediction 77 176 - -
Lapu11g01337 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 170 229 IPR017930 -
Lapu11g01337 428 MobiDBLite consensus disorder prediction 100 115 - -
Lapu11g01337 428 FunFam Two-component response regulator 169 232 - -
Lapu11g01337 428 MobiDBLite consensus disorder prediction 153 169 - -
Lapu11g01337 428 SUPERFAMILY Homeodomain-like 171 230 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01337 Lapu-Chr11 15478652 15484395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01337 1 369 G2-like Transcription Factor Family AT5G44190 38.847 9.83e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu11g01337 Myb_DNA-binding 5.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01337 - - gmx:100799248 633.254