Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01329 ATGCATTCATCCAGCATGTGGAGATTCATTAGGAGTGTGAAAGCAGGGTTTGGAACATCAACACAGGAGACAGGGAAAGGAAAAGGCAAATTATCAAAACACATTACACATGGCTTTCACTTGATGAAGGGAAAATCTGGGCATCCCATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAGAGAATTAGGCTTGTTTGCGATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTTCATAACATCTTGAAACAGAATGACTTTTGGACTGAGACAAAAAGTGCAGTGAAGAGGGCTTATCTTGAAACAGATGAGAAAATATTGGAACAAGCACTTGAATTGGGGCGAGGAGGGTCAACAGCTGTAACTGCAATACTGATTGATGGTCAAAAGCTTGTAGTAGGAAACGTTGGTGACTCAAGAGCGGTTATTTGTGAGCATGGAAAGGCTAGACAACTATCTGTAGATCATGAACCAAGCAAGGAAAAGAAATCTATTGAGAGGCGTGGGGGATTTGTATCAAACATTCCAGGAGATGTCCCTCGAGTAGATGGACAACTGGCAGTAGCAAGAGCCTTTGGTGATAGGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTTGTAGAAGAAGTACTTCATCATACAGAATTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAGGAGGCAGTGGATTCAATAAGGCAAATAAAGGATGCTCAAGCTGCAGCAAAGCACTTGATAGAAGAGGCAGTTTCCAAGAAAAGTAAAGATGACATATCTTGCATAGTTGTGAGGTTCCAATGA 855 0.4094 MHSSSMWRFIRSVKAGFGTSTQETGKGKGKLSKHITHGFHLMKGKSGHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFHNILKQNDFWTETKSAVKRAYLETDEKILEQALELGRGGSTAVTAILIDGQKLVVGNVGDSRAVICEHGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVFVEEVLHHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAVSKKSKDDISCIVVRFQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01329 284 PANTHER PROTEIN PHOSPHATASE 30 283 IPR015655 GO:0004722|GO:0006470
Lapu11g01329 284 CDD PP2Cc 37 283 IPR001932 -
Lapu11g01329 284 SMART PP2C_4 26 281 IPR001932 -
Lapu11g01329 284 FunFam Probable protein phosphatase 2C 39 27 284 - -
Lapu11g01329 284 SUPERFAMILY PP2C-like 33 283 IPR036457 -
Lapu11g01329 284 SMART PP2C_SIG_2 50 283 IPR001932 -
Lapu11g01329 284 Gene3D - 17 284 IPR036457 -
Lapu11g01329 284 ProSiteProfiles PPM-type phosphatase domain profile. 36 283 IPR001932 -
Lapu11g01329 284 Pfam Protein phosphatase 2C 48 276 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01329 Lapu-Chr11 15376301 15378513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01329 25 284 PP2C-type Phosphatase Gene Family AT4G28400 73.846 1.23e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01329 K17506 - gmx:100819846 487.648