Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01326 ATGATGGGTCTCACAACTGGGGTTGACGCTCCTGAGGATCCTCTCTTACCTTTTCTCTGGTCTATCAAGAAAGCCCTAGAAGTTTCTCATGAATCCTCTCCAAATCTCAGTAACTTACTCCAAGATTGCATCAGAAACTTCAAGAATAATGAGCGGTACCGAGACGACGTCAGATTCCTCAAGATCTGGCTCCTCTATATGGGAGTTAGTGATGATTTTGCCCATGTATTCAAAGAAATGCTGGACAGTACTATATGTGCCAAGAATTCTTCACTTTATGTGTGGTCTGCAAGTTTATTTGAGTTGAAGGGAAGATTGCATGATGCTCTCATCATCTATCAACTTGGCATTGACAGGAATGCGGAGCCAATTGAGTGGTTGAAGAAGGCGTCGACCTTATTCCTCAATAGAATGTTTGAAATACAGAATGCTGCTTCAAACCAGAAGATTGATGATATAGAATCCATGCAATTGGAAAATAATGGCGTTAATCCTTGGGACACTTCCACCATGGATAGCCTGTTAAAGACTATACATCCTTCAATTATAAAATTTGATGGATATCGTTCAAGCACTAAACCATACTCAGGAAAAGTGGCCTTATCTGCGTTGAAGAATTCATCAAGGAATAAAGTTATTGAGATAGGTGGAACGAAGTACCTGATAAAGGGATGTGCTGGACGGGGTGGTTTTGCCCAAGTATACAAGGCTAATGTCAACAGTGATCCTGAGAATGTTGTTGCTCTAAAGATACAAAAACCAGCTTTCCCGTGGGAATTTTACATTTATCGTCAGCTTGATCTGCGCATCTTAGGCAGGGAGAGGTCAAGTTATGGTTTCGCTCACCGAATTCATCTCTATTCTGACTGTAGTATACTCATATGTGACTATTTAGCTAATGGCACACTACAGGATGTGGTAAACTCATATGTGGTCTTGGGAAAATCCATGGAAGAAGTGCTATGCATTTATTACACAATTGAAATGTTACACATGGTTGAAACTTTGCATGGAGTTGGCTTGATTCATGGAGATTTCAAGCCTGATAATCTGCTAATTCGCTATGCTAGGGGTGACCTTAGAGAAGATGGGTTCTTGAACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCAGCTCTTTCCAGATGACACTCTATTTAAGGGTGATTGCAGAACTTCTGGTTTTCGCTGCATTGAAATGCTAGAGGATAAACCGTGGAAATTTCAGGTAGATGCATATGGCCTTTGTGCTATCGTTCATGTGATGTTGCATGGTTCCTATATGGAAGTCGTAAAAAAAGAACAATCTGATGGGGGCTACGTGTATCTTCCCAGACGACCCTTTAAACGTTACTGGAACATTGAGCTGTGGAGGAATTTCTTCACTAAGATGCTAAACCAATACCCCCATGATGATGATAGGAGCTTGCTGCAGGAGTTGAAGAAGTCCTTCCAAGACTATATGAACTCCGATCCCCAGCTTATAAAGAAACTAAAGGAGTTACTCTCAAAGCAAAGGGCTTCCATGTGTTCTGCTTAA 1572 0.4167 MMGLTTGVDAPEDPLLPFLWSIKKALEVSHESSPNLSNLLQDCIRNFKNNERYRDDVRFLKIWLLYMGVSDDFAHVFKEMLDSTICAKNSSLYVWSASLFELKGRLHDALIIYQLGIDRNAEPIEWLKKASTLFLNRMFEIQNAASNQKIDDIESMQLENNGVNPWDTSTMDSLLKTIHPSIIKFDGYRSSTKPYSGKVALSALKNSSRNKVIEIGGTKYLIKGCAGRGGFAQVYKANVNSDPENVVALKIQKPAFPWEFYIYRQLDLRILGRERSSYGFAHRIHLYSDCSILICDYLANGTLQDVVNSYVVLGKSMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDNLLIRYARGDLREDGFLNRSGPWCDQGLCLVDWGRGIDLQLFPDDTLFKGDCRTSGFRCIEMLEDKPWKFQVDAYGLCAIVHVMLHGSYMEVVKKEQSDGGYVYLPRRPFKRYWNIELWRNFFTKMLNQYPHDDDRSLLQELKKSFQDYMNSDPQLIKKLKELLSKQRASMCSA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01326 523 SUPERFAMILY Protein kinase-like (PK-like) 218 499 IPR011009 -
Lapu11g01326 523 Gene3D Transferase(Phosphotransferase) domain 1 218 521 - -
Lapu11g01326 523 FunFam Mitotic checkpoint serine/threonine-protein kinase BUB1 218 520 - -
Lapu11g01326 523 ProSiteProfiles Protein kinase domain profile. 220 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01326 523 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 146 517 IPR015661 GO:0007094
Lapu11g01326 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Lapu11g01326 523 Gene3D - 7 155 - -
Lapu11g01326 523 SMART mad3_bub1_i 7 117 IPR013212 -
Lapu11g01326 523 ProSiteProfiles BUB1 N-terminal domain profile. 1 160 IPR013212 -
Lapu11g01326 523 Pfam Protein kinase domain 227 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01326 523 Pfam Mad3/BUB1 homology region 1 11 117 IPR013212 -
Lapu11g01326 523 SMART serkin_6 220 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01326 Lapu-Chr11 15331574 15337725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01326 214 353 MAP Kinase Kinase Kinase Kinase AT1G53165 28.859 1.09e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Lapu11g01326 Pkinase 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01326 K02178 - gmx:100783171 929.858