Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01321 ATGTCTGAAGAATCACTGAGTATTGTGCTGATCCACTATGCATCAAGAGACTTCAATACAAGTGTCATAAAAGTGGTCATGCAGGGATTTTCACTTGGTCGTGGAGACAAGCTTACACTTGTTGTAATTCTTCGCCATGCTAATAGCCCCACTAGGCTTCCCTTCATTGCACCAGCCAGATTGCGAGGATTATTCGAGACTGATCACAAACTTGTTGAGGAAGAGGTTTCCAAGAAGAAAGAAGAACTCCTTAATAATGCAAGCATAAGGGAAATTTCTGAGCAGTGTGAAGCAGACAGGATCCAATTCCGGATAGAAGTTCTTCAGGGAAAATTACCAGAGCTTGCTGTAAATGCTGCCATCCGTTTGGAGGCAACATCAGTGATACTTGATAGACACATGAAGAAATATAAGAAGGATTTCAAGCAGAGTCTCTTTTGTTCTTTGCTAATAATGAAACGTGACCACTCTATGCAACACTTGAGAGGGCCAAGGGACACACATCTGTGTGATAGAAGCAATGGAAATGCAAGATGTGTTAGATGTCCTTATTCTAAATCTCCCCCGAGAATACAGCAAGTGACAAATTCCTGCTCCAATACCAGCTCTTCATTCCATACTCTTGCAAAGGTCGGGTGCCCCCAACTTTATTCTCAAATAGAACAAAATCCTGAAAATATAGAACAAGACATGGCAAGAGGGTATTGCCTACTACCCATTACTGATACTCGAAAGACTAATCATACTGAAGTGTATCACATAGAAACACCAGCAGAACATAGCAACAACCATGAAGCATATCACATAGTTGAACAATTCAAAAACTCTGTTTGCTCAGTATGCAAGAACAGAAGACCAAAATTTGAAGTGATGAAAGAATTCACATACGCGGAGCTGCATGCAGCTACACGAGGTTTTTCACCAAAAAACTTTTTGTCAGAAGGTGGATTTGGCTCTGTCTACAAAGGAATTCTGCAAGGAGGACTAAGGATTGCTGTTAAGCAGCATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAATTCAAATCTGAAGTCAATGCACTCAGCAGAGCTATACATGAGAATGTGGTCATGCTGCGTGGATCTTGTTCAGAAGGAAATAACAGGCTTCTTGTGTATGAATTTGTTTGCAATGGCTCTCTTGACCAACATTTATCAGAACACTCACGTAAGCCTCTTACGTGGGAAGAAAGGATCAAAGTAGCTATCGGAGCTGCAAAAGGCTTATTGTACTTGCATCAGAACAATATAATACACCGAGATATGAGGCCTAGCAACATCCTTGTTACACATGATTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCTTATACTCCACAGATGTTGTTGGAACTATAGGGTATTTGGCACCAGAATATGCAGAATCAGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTCGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGTAGACAAACGTCTTGCCGATAAAAGTCTTGTGGGATGGGCTAGGCCACTACTTAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTCTGGATGATTCGTCTAGCAGAAAAATGCCTCAGCAGGGATTCTCAGAGGCGCTTATCAATGGATACAGTGGTTGTTGCCTTAACTCATATACGGGAAGGAAACACATGCAGTGTTGTACTAAGAGACTGCTCTCCAGCACAGTCAGATTCATCCTATGACATGTCAGACTTGCTTATGTCAGATACCTCTCAGGAGATAGAAAATGAAGATGCAAGCATCTATGCAGGATATGCTCCTATTTGCTTAAGACCTCCACCATCTCCTCCATTAGGAAGCACTTCCTCAAGTACATCAAGCATGTTCACAGGGCAGAGTGAATCTCCTTTAGATGATTTCTCCAATAATGAGAATAAGGGTAAAAGGGCAAATGAACAAGGTGGGATACTCTAA 2016 0.4142 MSEESLSIVLIHYASRDFNTSVIKVVMQGFSLGRGDKLTLVVILRHANSPTRLPFIAPARLRGLFETDHKLVEEEVSKKKEELLNNASIREISEQCEADRIQFRIEVLQGKLPELAVNAAIRLEATSVILDRHMKKYKKDFKQSLFCSLLIMKRDHSMQHLRGPRDTHLCDRSNGNARCVRCPYSKSPPRIQQVTNSCSNTSSSFHTLAKVGCPQLYSQIEQNPENIEQDMARGYCLLPITDTRKTNHTEVYHIETPAEHSNNHEAYHIVEQFKNSVCSVCKNRRPKFEVMKEFTYAELHAATRGFSPKNFLSEGGFGSVYKGILQGGLRIAVKQHKCASLQGEKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSEHSRKPLTWEERIKVAIGAAKGLLYLHQNNIIHRDMRPSNILVTHDYEAMLGDFGLARTEQMDSLYSTDVVGTIGYLAPEYAESGKMSTKTDVYSFGVVLLQLITGMRTVDKRLADKSLVGWARPLLKERNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDSQRRLSMDTVVVALTHIREGNTCSVVLRDCSPAQSDSSYDMSDLLMSDTSQEIENEDASIYAGYAPICLRPPPSPPLGSTSSSTSSMFTGQSESPLDDFSNNENKGKRANEQGGIL* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01321 671 MobiDBLite consensus disorder prediction 634 654 - -
Lapu11g01321 671 ProSitePatterns Tyrosine protein kinases specific active-site signature. 423 435 IPR008266 GO:0004672|GO:0006468
Lapu11g01321 671 FunFam Proline-rich receptor-like protein kinase PERK8 268 381 - -
Lapu11g01321 671 ProSiteProfiles Protein kinase domain profile. 306 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01321 671 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 382 584 - -
Lapu11g01321 671 PANTHER OS01G0253100 PROTEIN 207 573 - -
Lapu11g01321 671 Pfam Protein tyrosine and serine/threonine kinase 311 567 IPR001245 GO:0004672|GO:0006468
Lapu11g01321 671 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Lapu11g01321 671 MobiDBLite consensus disorder prediction 627 671 - -
Lapu11g01321 671 Gene3D Transferase(Phosphotransferase) domain 1 382 586 - -
Lapu11g01321 671 Gene3D Phosphorylase Kinase; domain 1 267 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01321 Lapu-Chr11 15260547 15270051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01321 294 590 Trihelix Transcription Factor Family AT5G38560 46.602 1.41e-82 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lapu11g01321 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01321 - - vum:124838318 1144.03