Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01315 ATGCCAGTCCTAGAAACACTTGGTGGTGCTCTTTTTGGTGCTGTTCTTCAGGTGCTATTTCACAAGCTGGATTCTCATCAAGTTCTGCACTACTTTCGTGGGAGAAATCTCGACGAGAAACTGCTGAAAAAGTTGAAGAGAAAGCTGATGGACGTCAATGCTGTGATTGATGATGCAGAACAAAAGAAGTTCAGTAATCCCTTGGTCAAAGAATGGCTTGATGAGGTTCGAGACGCGTTGTATGATGCAGAGGATCTGTTGGAGCAAATCGATTATGAATTTTCCAGAAGTGAGTTGGAAGCTGAATTCCATACCAATGGTAGCAAGGTACGCAGTTTTGAATCCAAGATGATAGAAGTCCTAGATGATCTAGAATCTCTCTTAAACCAAAAGGTTGTTCAAGCTTTCAAAATTTCTAGTCGTGTCAGATCCGAATTCGGTAATAAAGTCTTGGAGAGAAAAAACGAATCCTCATCATTGGTGGCTGAAGAGGTTATTTATGGGAGAGATGAGGACAAATTAAGGACCCTTAATTGGCTGACATCTGACACCAACAATAAGCAGCTGTCAATACTTTGTATCGTGGGTATGGGAGGGATGGGTAAGACCACACTTGCTCAACATCTATACAATGACCCAAAGATTAAGGAAGCTAAATTTGACCTTAAAGCTTGGGTCTGTGTTTCAGATGAATTCGATGTTTTCATGTTAACCAAAGCAATTCATGAGGCAATCTGTAAGTCAACTGATGATAGCACTAACCTAGATATGGTTCAGAGACGACTGAAAGAAAAGTTGACAGGAAAGAAGTTTCTCCTCGTTCTAGATGATATCTGGAACGAAGACCGGGACCAATGGAAATCATTGCAAACTCCTCTTAAATATGGGGCTAAGGGAAGTAAAATTCTTGTCACCGCACGCAGTAACAAAGTTGCTTCTACCATGGAGTCAAAGAATATACACCAACTAAAGCAGTTACAAAAAGATCACAGTTGGGATGTTTTTGCTAAACATGCATTGCAGGATGATAGCTCTAAATTGAATTGTGAGTTGAAGGAGATTGGCATGAAGATAGTTGAAAAGTGCAAAGGATTACCTCTTGCCCTTGAAACGATAGGACGTAGTTTACAATCAAAGTCATCTGTTTCAGAGTGGGAAGGTGTATTGAGAAGCAACGTATGGGATTTACCTATTGAAGATAGTAAAATCATCCCCGCTTTGTTGCTGAGTTATTACCATCTTCCTTCTCATCTCAAGAGATGTTTTGCTTATTGTTCGTTATTTCCCAAAGACCATTTATTTGACAAAGAGAAATTAATTCTCTCATGGATGGCTGAAAATTTTCTACAATGCTCTAAGCAAAGTAAGTCCCCAGAAGAAGTAGGTGAACAGTACTTCAATGATCTATTATCAAGGTCGTTCTTTCAACAATCCAATAGAGGCTTCACAACATGTTTTGTCATGCACGACCTCCTCAATGATTTGGCAAAATATGTTTCTGGTGAAATCTGCTTCAGGTTGGGAGTTGATAGAGCAGAAAGAGTACCAAAGACAACCCGTCACTTTTCCACCGGAAAGGATTCTGTAAAATATGATGAGTATAGGAGTTTATGTGATGCTAAAAGGTTACGGACATTTGTGTCCATATCTAGCGATTGTGGGTTGTCAATACAAGAGTTGATCTCCAACTTCAAGTTCTTAAGGCTCTTATGTTTGTCTTATTGTCGTAACATAAAAGAGGTGCCTGACACTATAGCCGATCTTATACATCTCCGTTCATTAGACCTTTCAGGCACCAACATTAAGAAACTTCCCGACTCAATGTGTTCACTCTGTAACTTGCAAGTGCTGAAGCTGAACGAGTGTTTCTATTTGAAGGAGCTGCCCTCGACTTTGCATGAACTCACCAATTTGCGCCGCCTTGAACTTATGGTAACTACTTTAAGAAAGGTTCCGCTGCTTTTAGGAAAATTGAAGAATCTTCAAGTATGGATGAATAGGTTTGAGGTTGGCAAAAGTAGTGAGTTCGGTATTCAACAGCTAGGAGAACTTCATCTTCATGGACAACTGTCAATCAAAAATTTTCAAAATATTGTGAATCCCTGTGATATATTAGCAGCGAATTTGAAGAACAAAACACATCTTGTGGGGTTGCGTCTAGAATGGGATTTGAAGCAGAACATTGACGATTCAATGAAAGAAAGAGAAGTTCTTGAGAATCTGCAACCTTCCAGACATTTGGAGAAGTTGTTAATTGATGGCTATGGTGGTACAGAATTTCCCCGTTGGTTATCAGATAATTCTCTATCGAATGTGGTGTTCTTAAACTTGAATAACTGTAAGTATTGCCTGTGGTTGCCTTCGCTTGGACTTCTGACATCTCTCAAGCACTTGACAATTCACGGCCTTGATCAGATAGTAATAATTAATGCTGAGTTCTACGGGAATAGCTCTTCTACATTTGCATCCTTGGAAACGTTGAGCTTCTCTGATATGAAGGAATGGGAAGAATGGCAATGCATGACGGGTGCTTTTCCATGTCTTGAAAGTCTTTCTATAAAGTGTTGTCCCAAGCTGAAAGGGAACTTGCCAGAGAAACTTTCTCATTTAAAGAAATTAACTATTGAGCAATGCAAACAACTTGTGACTTCGATTCCCAGGGCCGTAGAGATTCAAGGTAAGAAGATGGAGTCATCTTCATTTGATAATATTGGGCACCTGGTATATGATACTCCTCTTGAATCCTTGGGTATTGATTATTGTCCGGGCATGAATATTCCCATAAACCATTGCTACCATTTCCTTATAGAATTGAGTATCAGTCATAGTTGTGAATCTCTGAAGAACTTTCCTCTAGATTTGTTCCCAAAACTCCGCAAGCTTCAATTAGACGAGTGTCGTAACCTAGAGATGATATCACAAGAGCACCCTCATAGGGATTTGAAGAGTATGAGCATTGTAAAATGCTCTAAATTTGAGTCATTTCCCAATGAAGGATTATTTGCACCACAGCTAGAGAGCTTTTTTATTAAAAGATTGGGGAAATTGAAATCAATGCCTAAACGCATGTCTTCCCTCCTTCCATCTCTTAATTATCTGTACATACTTGACTGTCCAGGAGTGGAGTTCTCTGATGGATGTTTGCCATCAAATCTAAAAGAAATGAGTCTCTTGAATTGCTCCAAGCTTGTAGCCTTACTAAAGGGGGTTTGGGGAACCAACCCTTCCCTAGAATCTTTGAACATTCACGAAGTGGATGTGGAGTGTTTTCCAGGTGAAGGTTTGCTCCCACTCTCTCTTACTAATCTAGTGATATGTGATTGTTCAAATCTTAAGAAACTGGACTATAAGGGTCTGAGTCACCTCTCTTCTCTGGAGAAATTGGTTCTTCTTCATTGCCCTAACCTTCAATGCTTGCCAGAGGAGGGTCTGCCCAAATCCATTTCAGAACTCAGAATTGAAGACTGCCCGTTGCTAAAACAGCGCTGCAAGAAACAAGAAGGTGAAGACTGGGAAAAGATTGCTCACATCAAAACCATATGGCTTGATCACGAACAAGTAAACTTAACAAACGAAGCACAAGTTGAAAGTTACTAA 3597 0.3984 MPVLETLGGALFGAVLQVLFHKLDSHQVLHYFRGRNLDEKLLKKLKRKLMDVNAVIDDAEQKKFSNPLVKEWLDEVRDALYDAEDLLEQIDYEFSRSELEAEFHTNGSKVRSFESKMIEVLDDLESLLNQKVVQAFKISSRVRSEFGNKVLERKNESSSLVAEEVIYGRDEDKLRTLNWLTSDTNNKQLSILCIVGMGGMGKTTLAQHLYNDPKIKEAKFDLKAWVCVSDEFDVFMLTKAIHEAICKSTDDSTNLDMVQRRLKEKLTGKKFLLVLDDIWNEDRDQWKSLQTPLKYGAKGSKILVTARSNKVASTMESKNIHQLKQLQKDHSWDVFAKHALQDDSSKLNCELKEIGMKIVEKCKGLPLALETIGRSLQSKSSVSEWEGVLRSNVWDLPIEDSKIIPALLLSYYHLPSHLKRCFAYCSLFPKDHLFDKEKLILSWMAENFLQCSKQSKSPEEVGEQYFNDLLSRSFFQQSNRGFTTCFVMHDLLNDLAKYVSGEICFRLGVDRAERVPKTTRHFSTGKDSVKYDEYRSLCDAKRLRTFVSISSDCGLSIQELISNFKFLRLLCLSYCRNIKEVPDTIADLIHLRSLDLSGTNIKKLPDSMCSLCNLQVLKLNECFYLKELPSTLHELTNLRRLELMVTTLRKVPLLLGKLKNLQVWMNRFEVGKSSEFGIQQLGELHLHGQLSIKNFQNIVNPCDILAANLKNKTHLVGLRLEWDLKQNIDDSMKEREVLENLQPSRHLEKLLIDGYGGTEFPRWLSDNSLSNVVFLNLNNCKYCLWLPSLGLLTSLKHLTIHGLDQIVIINAEFYGNSSSTFASLETLSFSDMKEWEEWQCMTGAFPCLESLSIKCCPKLKGNLPEKLSHLKKLTIEQCKQLVTSIPRAVEIQGKKMESSSFDNIGHLVYDTPLESLGIDYCPGMNIPINHCYHFLIELSISHSCESLKNFPLDLFPKLRKLQLDECRNLEMISQEHPHRDLKSMSIVKCSKFESFPNEGLFAPQLESFFIKRLGKLKSMPKRMSSLLPSLNYLYILDCPGVEFSDGCLPSNLKEMSLLNCSKLVALLKGVWGTNPSLESLNIHEVDVECFPGEGLLPLSLTNLVICDCSNLKKLDYKGLSHLSSLEKLVLLHCPNLQCLPEEGLPKSISELRIEDCPLLKQRCKKQEGEDWEKIAHIKTIWLDHEQVNLTNEAQVESY* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01315 1198 Gene3D - 16 129 - -
Lapu11g01315 1198 Pfam Rx N-terminal domain 13 104 IPR041118 -
Lapu11g01315 1198 Pfam NB-ARC domain 175 389 IPR002182 GO:0043531
Lapu11g01315 1198 SUPERFAMILY L domain-like 910 1175 - -
Lapu11g01315 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 425 IPR027417 -
Lapu11g01315 1198 FunFam Probable disease resistance protein At1g61300 149 319 - -
Lapu11g01315 1198 Gene3D - 410 498 IPR036388 -
Lapu11g01315 1198 Gene3D Ribonuclease Inhibitor 887 1182 IPR032675 -
Lapu11g01315 1198 FunFam Probable disease resistance protein At1g63360 411 498 - -
Lapu11g01315 1198 PRINTS Disease resistance protein signature 362 376 - -
Lapu11g01315 1198 PRINTS Disease resistance protein signature 865 881 - -
Lapu11g01315 1198 PRINTS Disease resistance protein signature 191 206 - -
Lapu11g01315 1198 PRINTS Disease resistance protein signature 265 279 - -
Lapu11g01315 1198 PANTHER DISEASE RESISTANCE PROTEIN RP 42 883 IPR044974 GO:0006952
Lapu11g01315 1198 Gene3D Ribonuclease Inhibitor 684 882 IPR032675 -
Lapu11g01315 1198 SUPERFAMILY L domain-like 487 880 - -
Lapu11g01315 1198 Gene3D Ribonuclease Inhibitor 533 683 IPR032675 -
Lapu11g01315 1198 Gene3D - 145 322 IPR027417 -
Lapu11g01315 1198 Gene3D - 325 409 IPR042197 -
Lapu11g01315 1198 Coils Coil 42 62 - -
Lapu11g01315 1198 ProSiteProfiles Leucine-rich repeat profile. 590 611 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01315 Lapu-Chr11 15234343 15238722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01315 185 386 WRKY Transcription Factor Family AT5G45050 26.442 1.40e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01315 - - vun:114168932 1713.35