Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01310 ATGTCCTCAGATGCAGCCACAAGCAAAGGTCATAATAACTACACCAGCATAGGAAGCAACACCACTGTGTATGGCCTCTACAATTGCCGTGGTGACGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTAATGCTGCCAGAGAAGTTACTCAGCACTGCCCCAATAGGGTGTCTGCTATGGTGTGGTATGATTTCTGCATTCTAAGGTACTCAAATGAGAACTTCTTTGGGAAGATTCTTACTCACCCAACATGGCATGCTTTTGGAACAAAAAACATTTCCAGCAAGGAAGAGATGAAGAAAGGTGAGGATTTTATGAGAAGCTTGATCAGAAAAGCAACTGTGGAGACCAACAAGTTGTACTACAAGGATGACTTCAATTTGAGTTCCACTCAAGGAAGGTATGGCTTGGTGCAATGCACTGCAGATGTCACAAATGATGGGTGCAGAGAGTGTTTGGAGGCCATGTTAGCAGAAGTTCCCAAATATTTTGAACAAAAATTAGGATGGTTCATTTGGTGTGGAACTTATGGGATTCGGCTATCATCATTTCATAAAATTCAAACCGAGGAAACATTGAACACTGACCTGCCTATAATCCCATTAATCACAATTCTGCAGAGTACTGATAACTTTTCAGAAGCATCTAAATTGGGGGAAGGTGGATTTGGCTCCGTTTACAAGGGAATGCTACCTGATGGAAGACAAATAGCAGTCAAAAGGCTGTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTTTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTCTTTGCATGTTGCTTGGAGGAAAATGAAAAGATACTTGTATACGAGTATATGCCAAACTCAAGTCTGTACTTTCACCTGTTTGATGATGAGAAAAGAAAACAACTTGATTGGAAACTGAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTCTATACCTTCATGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTTTATTGGACCATGACATGAATCCCAAAATATCAGATTTTGGATTGGCAAAGGCATTTGAAATTGGACAGAACCAAGCAAATACAAAGAGAGTAATGGGCACATATGGATACATGGCTCCTGAGTACGCTATGCAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGTTCTAGAAACCATTTGTGGGAGAAAGAACAACGGATTCTATCTGTCAGAACATGGTCAAACACTTCTTTCATATGTTTGGAGAATATGGTGTGAAGGAAAATGTTTGGAGTTGATGGACCCAATGCTGGACAAATCCTTCAAAGCCAGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTGTGTGTTCAAGAAAATGCAACATATAGACCAACCATGTCAGATGTTGTTGTAATGCTAGGGAGTGACAAAATGACCATTCCAAAACCCAAAAACCCAGCATTTTCAATTGGAAGAAAGGTCTCAGAGGAAGTACCTAAATCAACAAGATCCAAGAATATTTTTAATACTGATGTAACAATCTCTATTACTTTACCAAGGTAA 1593 0.3936 MSSDAATSKGHNNYTSIGSNTTVYGLYNCRGDVVGYFCQFCVSNAAREVTQHCPNRVSAMVWYDFCILRYSNENFFGKILTHPTWHAFGTKNISSKEEMKKGEDFMRSLIRKATVETNKLYYKDDFNLSSTQGRYGLVQCTADVTNDGCRECLEAMLAEVPKYFEQKLGWFIWCGTYGIRLSSFHKIQTEETLNTDLPIIPLITILQSTDNFSEASKLGEGGFGSVYKGMLPDGRQIAVKRLSKFSGQGSEEFNNEVMFIAKLQHRNLVRLFACCLEENEKILVYEYMPNSSLYFHLFDDEKRKQLDWKLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHDMNPKISDFGLAKAFEIGQNQANTKRVMGTYGYMAPEYAMQGLFSVKSDVFSFGVLVLETICGRKNNGFYLSEHGQTLLSYVWRIWCEGKCLELMDPMLDKSFKASEVEKCIHIALLCVQENATYRPTMSDVVVMLGSDKMTIPKPKNPAFSIGRKVSEEVPKSTRSKNIFNTDVTISITLPR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01310 530 Gene3D Transferase(Phosphotransferase) domain 1 288 495 - -
Lapu11g01310 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Lapu11g01310 530 Gene3D - 1 75 IPR038408 -
Lapu11g01310 530 Gene3D - 84 180 IPR038408 -
Lapu11g01310 530 Gene3D Phosphorylase Kinase; domain 1 181 287 - -
Lapu11g01310 530 Pfam Salt stress response/antifungal 9 72 IPR002902 -
Lapu11g01310 530 Pfam Salt stress response/antifungal 103 158 IPR002902 -
Lapu11g01310 530 CDD STKc_IRAK 218 483 - -
Lapu11g01310 530 ProSitePatterns Protein kinases ATP-binding region signature. 218 240 IPR017441 GO:0005524
Lapu11g01310 530 ProSiteProfiles Gnk2-homologous domain profile. 1 75 IPR002902 -
Lapu11g01310 530 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 179 287 - -
Lapu11g01310 530 SMART serkin_6 212 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01310 530 ProSiteProfiles Protein kinase domain profile. 212 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01310 530 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 523 - -
Lapu11g01310 530 Pfam Protein tyrosine and serine/threonine kinase 215 482 IPR001245 GO:0004672|GO:0006468
Lapu11g01310 530 ProSiteProfiles Gnk2-homologous domain profile. 81 186 IPR002902 -
Lapu11g01310 530 SUPERFAMILY Protein kinase-like (PK-like) 187 483 IPR011009 -
Lapu11g01310 530 FunFam cysteine-rich receptor-like protein kinase 10 288 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01310 Lapu-Chr11 15167778 15170650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01310 38 498 Receptor kinase-like Gene Family AT4G11490 40.727 1.92e-128 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01310 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01310 - - var:108339140 756.903