Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01305 ATGGGGATCAAAACAAAAATATTCATGACCCCTATTAGGGTTTATCTTAGCTTCATGGTCCTCCTTTTCATCACAACAAGTGCTCAAGCCCCCATTTACATGAACAGTTTTTGTGATAACTCAACTCTTGTTAGCCCTTCATACAAAGCCAACATTGACACCCTCCTCTCATGGTTAACCACAGACTCATACAAAGGCGATGGATACAACTACACCACTGTAGATAACAACAACCATAACAATGATAATGAAGATGCTGTTTATGGATTATACAGCTGCAGATATGACATCACAGGGTACTTTTGCCAGTTCTGCATCACCACTGCTGCCACTGAACTCTCTCGAAGGTGTTCCAACAGTGTAAGAGCTATAATATGGTATGACATATGCATCATTCGTTACTCGAACCAAAGTTTCAATGGCAAAGTTAGTTTAACCCCAATATGGAATACTACAGGAACCAGAAAAATCAAGGACACAGCAGAAGTTAAGAAAGCTGAGGATTCTATGGAGGGTTTGATCAGAAAAGCAACCATAGAGACCAAGAAATTTTGGGCAGTGGATGAGTTTGATTGGGTTGACAATGAGAAAAGATATGGGTGGGTGCAATGTGATAGAGGTATTACAAATGATGAGTGTGGTCAGTGTTTGCATGCATCGTTAGACATATTTCCTCAGTGTTGTTCCACAAATGTACAGTGGGCAATTTTTGGTCCAAGCTGTAGCCTCAGGATGGATGATCAAAATCTCTACCAGAGTTCAGGCAATGGAGGTACTAGTAAGTCAAGAAAGTTGATCATTTTCTTCAGTGTGTTGGGGTCTGTAGCTCTACTATGTTTCAGTGCCTACTGCTTCTGGTGCAGGAAAAGAGTCAGAAAAGATAAGATGATGTTTGATGAGGAAACATTGAATGGAGATCTTCCTACAATCCCATTAATCGCAGTTCTACATAGTACTAATAACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGTTTTGGCCCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTAAAACGGCTCTCAAAATTTTCTGGTCAGGGCTCCGAGGAGTTCAAGAATGAAGTCATGTTTATAGCTAAATTGCAACATCGCAACCTTGTGAGACTTTTGGGGTGCTGCTTGGAGGAAAATGAGAAGATACTTGTATATGAGTATATGTCTAATGCAAGCCTCGACTTTCACCTCTTTCGTGATAATGAGAAGAGAAAGCAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATTTTATATCTTCACGAGGACTCTCGACTCAAAGTAATTCATAGAGATCTCAAAGCTAGCAATGTGCTATTGGATGCTGAGATGAATCCCAAGATATCAGATTTTGGATTAGCCAGGGCATTTGAAATAGGACAGAACCAAGCAAATACAAAACGAGTAGTGGGCACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCCGTGAAATCGGATGTTTTCAGCTTTGGAGTTCTTGTCCTAGAAATCATTTGTGGGAGTAAGAATAGTGGATTCCATCGATCTGAACATGGTCAAAGTCTTCTTTTATATACTTGGGACTTATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAGCACTGATAAAATCCTTCATAGCTAGTGAGGTTGTCAGGTGCATACACATTGGTTTGCTGTGTGTTCAACAAGATGCAGCAGATAGACCAACCATGTCTACGGTTGTTCTAATGCTAGGAAGTGACACAACGGCCCTTCCAAAACCCAATCACCCTGCATTTTCTGTAGGAAAATTGACCTCTAAAGAAGCATCAACTTCAAGTTCCAAGAATATTTCTATTTATGATGTAACAGTCTCAACCGATTTAGCAAGGTGA 1923 0.4009 MGIKTKIFMTPIRVYLSFMVLLFITTSAQAPIYMNSFCDNSTLVSPSYKANIDTLLSWLTTDSYKGDGYNYTTVDNNNHNNDNEDAVYGLYSCRYDITGYFCQFCITTAATELSRRCSNSVRAIIWYDICIIRYSNQSFNGKVSLTPIWNTTGTRKIKDTAEVKKAEDSMEGLIRKATIETKKFWAVDEFDWVDNEKRYGWVQCDRGITNDECGQCLHASLDIFPQCCSTNVQWAIFGPSCSLRMDDQNLYQSSGNGGTSKSRKLIIFFSVLGSVALLCFSAYCFWCRKRVRKDKMMFDEETLNGDLPTIPLIAVLHSTNNFSEASKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSEEFKNEVMFIAKLQHRNLVRLLGCCLEENEKILVYEYMSNASLDFHLFRDNEKRKQLDWKLRLSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDAEMNPKISDFGLARAFEIGQNQANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGSKNSGFHRSEHGQSLLLYTWDLWCAGKCLELMDPALIKSFIASEVVRCIHIGLLCVQQDAADRPTMSTVVLMLGSDTTALPKPNHPAFSVGKLTSKEASTSSSKNISIYDVTVSTDLAR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01305 640 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 287 397 - -
Lapu11g01305 640 ProSiteProfiles Protein kinase domain profile. 322 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01305 640 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Lapu11g01305 640 Pfam Salt stress response/antifungal 45 137 IPR002902 -
Lapu11g01305 640 Pfam Salt stress response/antifungal 183 247 IPR002902 -
Lapu11g01305 640 Pfam Protein tyrosine and serine/threonine kinase 326 591 IPR001245 GO:0004672|GO:0006468
Lapu11g01305 640 CDD STKc_IRAK 328 594 - -
Lapu11g01305 640 Gene3D - 146 249 IPR038408 -
Lapu11g01305 640 Gene3D - 31 139 IPR038408 -
Lapu11g01305 640 SMART serkin_6 322 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01305 640 Gene3D Transferase(Phosphotransferase) domain 1 398 603 - -
Lapu11g01305 640 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 618 - -
Lapu11g01305 640 ProSiteProfiles Gnk2-homologous domain profile. 29 139 IPR002902 -
Lapu11g01305 640 FunFam cysteine-rich receptor-like protein kinase 10 398 601 - -
Lapu11g01305 640 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Lapu11g01305 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lapu11g01305 640 SUPERFAMILY Protein kinase-like (PK-like) 307 594 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01305 Lapu-Chr11 15125103 15130571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01305 8 640 Receptor kinase-like Gene Family AT4G05200 41.410 3.68e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01305 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01305 - - var:108339138 1085.09