Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01302 ATGGAGGGAAAACAACTCAACGTGAGATCAATATATTCCTTTATTTTTCTGCTTTTGCTAGGCTTCAAACCACTTGTTACAGAAGCACAATCACCCAACTATGTGGGAGATGACTGCGCTTCCACCACCCCAAAATCTCTCAGCAGTGCATACAAAGCCAACCTTAATAGTGTCCTCTCATGGCTATCCGCAGATGCAGCCACAAGCAAGGGCTATAACCACAACAGCTTTGGCAACAACACCCCTGGTGCAGATGCTGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTTGCTGGATACTTTTGTCAGTTCTGTGTGTCCACTGCTTCCAGAGAAGTTCTTCAGCGCTGCCCCAACAGGGTATCTGCTATTGTATGGTATGATTTCTGCATCTTAAGGTACTCAGATGAGAACTTCTTTGGGAATGTTACAGTAGATCCGTCATGGAATCATACTGGAACAAAAAATGCCTCTAGTGCGGAAGAGATTCAGAAGGGTGAGGGTTTTATGAGAAGTTTGATCAGAAAAGCTACCGTGGAGACCAACCAGCTGTACTATATGGATGGCTTCAATTTGAGTTCCTCTCAGAGAAGGTATGGCTTGGTTCAATGCAGTAGAGATCTCACAAGTGATGGGTGCAGACAGTGTTTGGAGACCATGTTAGCCAAAGTTCCCAAATGTTGTGAGCATAAGTTGGGGTGGCAAGTTTCGACTGCAAGTTGTCTCATAAAGTATGATGACTATATTTTCTACCTTTTTCACTATCCAGCATCTTCTGTTTCTGTGCCCGATGAACAAATAGCCAAAAAAAAGAGTGGTAGGAAGGCAAAACTATTGATCATTGGTTTAAGCGTGCTGGGGGCAGTAGCTTTGATATTTTTCAGTGTTTATTGCTTCTGGTTCAGGAAAAGAACTAGAAGTGGAAGAAGAACGGGTGGGCGTATTCCTGACACCATTCGTTTATCATCATATCACAATGTTCAAACTGAGGAAACACTGAATCCAGACCTGCCTACAATCCCATTAATCACAATTCTACAAAGTACTGATAACTTTTCAGAAGCATCTAAGCTAGGAGAAGGTGGATTTGGCCCCGTTTACAAGGGAGTTCTACCAGATGGAAGACAAATTGCAGTCAAAAGACTCTCAGAAACTTCGGGCCAAGGGTCAGAAGAGTTCAAGAATGAAGTAACTTTTATAGCCAAATTGCAACATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAAAGAGAAGATACTTGTATATGAGTATATGACGAATGCAAGTCTCGACTTTCACCTCTTTGATGAGAGAAAGAAAAGACAGCTCGATTGGAAACTAAGATTAAGCATTATACATGGCATAGCAAAAGGTCTTCTATACCTTCACGAGGATTCTAGACTCAAAGTTATTCATAGAGATCTCAAAGCTAGTAATGTTTTATTAGATGATGAGATGAATCCTAAAATATCAGATTTTGGATTGGCAAGATCATTTGAGAAAGGCCAGAACCAAGCAAATACAAGACGAGTAATGGGCACATATGGATACATGGCTCCTGAGTACGCTATGGAAGGATTGTTTTCAGTGAAATCTGATGTTTTCAGTTATGGAGTTCTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTATCAGAATGTGGACAAAGTCTTACATTATATGCTTGGAAAGCTTGGTGTGCAGGAAAATGTTTGGAACTGATGGATCCAGTGCTGGAGGAATTTTTTGTGGAGAGTGAAGTTGTGAAGTGCATACAGATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACAATGTCCACTGTGGTTGTAATGCTAGCAAGTGACATAATGTCTCTTCCAAAACCTAACCAACCTGCATTTTCAGTAGGAAGAATGACCTTAGACGATGCATCTACATCAAAAAGCTCCAAGAATCTTTCCATCAATGATGTAACTGTCTCTAAAATTTTACCAAGGTAA 2016 0.4112 MEGKQLNVRSIYSFIFLLLLGFKPLVTEAQSPNYVGDDCASTTPKSLSSAYKANLNSVLSWLSADAATSKGYNHNSFGNNTPGADAAVYGLYDCRGDVAGYFCQFCVSTASREVLQRCPNRVSAIVWYDFCILRYSDENFFGNVTVDPSWNHTGTKNASSAEEIQKGEGFMRSLIRKATVETNQLYYMDGFNLSSSQRRYGLVQCSRDLTSDGCRQCLETMLAKVPKCCEHKLGWQVSTASCLIKYDDYIFYLFHYPASSVSVPDEQIAKKKSGRKAKLLIIGLSVLGAVALIFFSVYCFWFRKRTRSGRRTGGRIPDTIRLSSYHNVQTEETLNPDLPTIPLITILQSTDNFSEASKLGEGGFGPVYKGVLPDGRQIAVKRLSETSGQGSEEFKNEVTFIAKLQHRNLVRLLACCLEEKEKILVYEYMTNASLDFHLFDERKKRQLDWKLRLSIIHGIAKGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARSFEKGQNQANTRRVMGTYGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSECGQSLTLYAWKAWCAGKCLELMDPVLEEFFVESEVVKCIQIGLLCVQEDAADRPTMSTVVVMLASDIMSLPKPNQPAFSVGRMTLDDASTSKSSKNLSINDVTVSKILPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01302 671 FunFam Cysteine-rich receptor-like protein kinase 28 35 139 - -
Lapu11g01302 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 667 - -
Lapu11g01302 671 Pfam Domain of unknown function (DUF3403) 626 671 IPR021820 GO:0004674
Lapu11g01302 671 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
Lapu11g01302 671 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01302 671 SUPERFAMILY Protein kinase-like (PK-like) 338 653 IPR011009 -
Lapu11g01302 671 Gene3D - 147 251 IPR038408 -
Lapu11g01302 671 Gene3D - 33 140 IPR038408 -
Lapu11g01302 671 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Lapu11g01302 671 FunFam Cysteine-rich receptor-like protein kinase 10 148 251 - -
Lapu11g01302 671 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Lapu11g01302 671 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01302 671 FunFam Liguleless narrow1 429 632 - -
Lapu11g01302 671 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Lapu11g01302 671 CDD STKc_IRAK 359 624 - -
Lapu11g01302 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Lapu11g01302 671 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Lapu11g01302 671 Pfam Salt stress response/antifungal 171 249 IPR002902 -
Lapu11g01302 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 318 428 - -
Lapu11g01302 671 Gene3D Transferase(Phosphotransferase) domain 1 429 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01302 Lapu-Chr11 15092482 15096293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01302 15 671 Receptor kinase-like Gene Family AT4G05200 41.090 1.65e-174 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g01302 PK_Tyr_Ser-Thr 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01302 - - gmx:100796972 1125.92