Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01296 ATGAACACTTTGAGTGATGAAATCTTCAAATTGCAGGCTCGAATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGGAAGATAGCACTGGCTGTGCCTGTTTTAGTTTCTAAGGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACACTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGGGTTCCTGATTACGGCCATGGCCATGGCCATGCTGAGGCTGGTGCTGATGATAGGACCATTTCAAAAAGAAGGAAAGCTGTCGGTGATGACTGTAATGACAGTGATGAAGAGGTTAAGAGGAGCAAGATGCATGAGTTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCTTGCACTTCTGTTCAGCCGAGCAACCAACAAAATACAAACACAAGTGTTGCAGTGGACAGTGGTTCTGAGTCAAAGGATATACTACCAAAGGAGGAGAATATTGCAGTTCCTGCTGTAAGCACTGATTCACTTCGGAACATCGATCTGAATGCCATTACGAATGAGAACGACGACAAAAAGGCTAGCATGGCAGCTGATACCTCATTGCCGGAACCTCCTTCAACAGAGGGCAAACATGAAGAAATTCTGGGGTGGCCCCTTCCTGACGTGGACAAGATGGCCATTGATTCGACACAGCTTGCACAGCTCAGTAGGCCACTAGAAGAAGAGGAGGAAGATTATGATGAGGAGGAAGGGTAA 873 0.4582 MNTLSDEIFKLQARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHAEAGADDRTISKRRKAVGDDCNDSDEEVKRSKMHELSHTGSTGRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCTSVQPSNQQNTNTSVAVDSGSESKDILPKEENIAVPAVSTDSLRNIDLNAITNENDDKKASMAADTSLPEPPSTEGKHEEILGWPLPDVDKMAIDSTQLAQLSRPLEEEEEDYDEEEG* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01296 290 FunFam dr1-associated corepressor homolog 3 87 - -
Lapu11g01296 290 SUPERFAMILY Histone-fold 19 88 IPR009072 GO:0046982
Lapu11g01296 290 MobiDBLite consensus disorder prediction 226 290 - -
Lapu11g01296 290 Coils Coil 1 21 - -
Lapu11g01296 290 Gene3D Histone, subunit A 7 87 IPR009072 GO:0046982
Lapu11g01296 290 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 13 126 - -
Lapu11g01296 290 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 72 IPR003958 -
Lapu11g01296 290 Coils Coil 271 290 - -
Lapu11g01296 290 MobiDBLite consensus disorder prediction 168 192 - -
Lapu11g01296 290 MobiDBLite consensus disorder prediction 92 138 - -
Lapu11g01296 290 MobiDBLite consensus disorder prediction 92 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01296 Lapu-Chr11 15040411 15045790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01296 13 276 CCAAT-HAP5 Transcription Factor Family AT3G12480 47.842 5.70e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lapu11g01296 CBFD_NFYB_HMF 3.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01296 K21752 - gmx:100814712 437.958