Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01294 ATGGCTACTCAAAAGCTTGAAGGTTGTGCAAAGTTCTTTGCAAGCTCAAAACCCTACTTGGCTATGATCTCTTTACAGTTTGGCTATGCTGGCATGAACATCATCACTAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGTCACGCTTTTGCTACTCTCGCCATAGCTCCTTTTGCATTTATTTTCGAGAGGAAAGGTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTTATCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGCTTGAAGCTCACATCCCCAACCTTCTCTTGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCAGTGTTTTGCAGGATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGATAGTGGGAACATTGGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCCATAGTGGAGATGGTTTGGGCAAAACATCCTCACAATAACACAAATGGAACAACCACCACAGGATCATTAGACAAAGATTGGTTCCTAGGATGCATCTTTCTTATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACCTACAAGAATCATCAACTAAGCCTCACTTCACTTGTGTGCTTTATAGGCACTATTCAAGCTATTGCTGTTACTTTTGTTGCTGAACACAACCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGCATTGTGACATCAAGCATATCATACTATGTACAAGGACTTGTGATTAAGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCTTTGATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAACAAATTTATCTTGGAGGTGTGATTGGTGCAATCTTGATTGTGATAGGATTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAATAGAGAGTAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAAGATGCTCAAAGTTCTGTGTTTTCAGGGCTAAATATGATGGATGGCACAAGTGATTTCAGTGAAGAAAAATGTGGTCAGAAAGAAGAGTCAAACAATAAGAAGCTCTCTTCAGTTGTAATATCCATGCCTATCAGAGAGCCTCTCACCAGAGATAACCAAGAGGGAAAGGCTTAA 1233 0.4112 MATQKLEGCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATLAIAPFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINMKQVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNNTNGTTTTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTIQAIAVTFVAEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQSSVFSGLNMMDGTSDFSEEKCGQKEESNNKKLSSVVISMPIREPLTRDNQEGKA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01294 410 PANTHER WAT1-RELATED PROTEIN 17 344 IPR030184 GO:0016020|GO:0022857
Lapu11g01294 410 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Lapu11g01294 410 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Lapu11g01294 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Lapu11g01294 410 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01294 Lapu-Chr11 15023273 15027186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01294 1 407 Nodulin-like Gene Family AT5G07050 64.833 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01294 - - gmx:100804390 711.835