Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01290 ATGGCCTCTTCAAATTCACCGTGTGCAGCATGCAAGTTCCTGCGTCGCAAATGCCAACCTGAGTGTGCTTTTGCACCATATTTCCCTCCTGACCAACCTCAAAAGTTTGCAAATGTTCATAGAATTTTTGGGGCCAGCAATGTCACCAAGCTTCTCAACGATTTGCACCCTCATCAACGTGAAGATGCTGTGAATTCCCTTGCTTATGAAGCTGAGATGAGACTCCGTGACCCTGTGTATGGATGTGTTGGAGTGATATCTCTCCTACAGCACCAACTTCGCCAGCTTCAAATGGATCTATACTGTGCCAAATCTGAGCTATCTAGGTACCAAAACCTAAGCATCACCACCAATCACAGCCTCATGGCCTCTGAATCCACCACAGCCTACCACCACCACCACCAGAACAACACTGGTAATACCTTTGGCCGAGACCATCACTATCACTTTCACCACCACCAGTTTTTTCCCAGAGACCAACACCAACAAGTAGCAAGAACCTTTGATGGAGGCAACAACTACGATGCAAGCCTCTTGGCCATGAACATATCTGCCAGCTTAGGGCAACTCAACCAGCTTCAGCATCAGAGTGCTGCTGGTGGAGGTGATGACCGCCACACTGCCAACCGCTCCTAG 636 0.489 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHSLMASESTTAYHHHHQNNTGNTFGRDHHYHFHHHQFFPRDQHQQVARTFDGGNNYDASLLAMNISASLGQLNQLQHQSAAGGGDDRHTANRS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01290 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 137 - -
Lapu11g01290 211 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lapu11g01290 211 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01290 Lapu-Chr11 14983621 14984256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01290 2 211 AS2 family AT1G65620 62.037 4.64e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu11g01290 LOB 2.9e-42 No_clan