Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01277 ATGGTTCACAGAAGATTGAAAGAAAAATTGACGGAGAAGAAATTTCTTCTTGTTTTGGATGACGTTTGGAACGAAAACCAATCTAAATGGGAAGGTGTTCAAAAGCCCCTTGTTTTTGGAGCCCCAGGGAGTCGGATTCTTGTCACTACACGTAGTAAGGAAGTTGTTTCAACCATGCGGTCAAAGGAACACTCCCTAGAGCAATTAGGGGAAGATCATTGCTGGAAGTTGTTTGCTAAACATGCATTTCAAGATGATGATACTCAACCAAATCCAGAGTATAGGGAGATTGGCATGAAGATAGTGAAAAAATGTAAAGGACTACCTCTTGCCTTGAAAACAATGGGAAGTCTATTATACAATAAATCATCTGTAGCAGAATGGCAAACTGTGTTCCAAAGTGAAATATGGGAATTTTCGAAAGAGCGTTGTGATATTATCCCTGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTTAAGGCATGCTTTGCTTACTGTGCCCTATTCCCCAAGGATTATGAGTTTAAGAAGGAGTGTTTGATTCAGTTATGGATGACTGAAAATTTTCTGCACTGTCGTCAACAGGGTAAGACTGCAGAAGAAGCTGGTGAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACAATTAGGTGAAAAGAAAGAAGTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTGGTGGAGGCATATACTTCAGGTGGGAAGTTGATCAAGCAGAAAAAGTACAGAAAGTAACTCGTCATTTTTCAGTTGAACTTGGTCAGAATCAACATTTTGATGGGTTTGAAACTTTATGTAATACAGAAAGGTTACGTACATTTATGCCGGCAAGTAGGAGCGTGAATGAACTTTCCTATCGTTGGCATTGCAATATGTCGATACATGAATTGTTCACCAAGTTTAAGTTCTTACGTATCTTATCTCTGTCTCATTGTTCTGACCTTAAAGAGGTACCTGACTCTGTTGTCAATCTTGAGGATCTCCGCTTGTTAGACCTCTCCTGTACTGCCATAAAAAAACTATCTGAAAAGATATGTTCACTCTCCCACTTGCAAATACTGAAGTTGAACAACTGTCCAAATTTGGAGGGAGTTCGGTATTCAACAGCTAGGAGAGCTCAACCTTGA 1173 0.3905 MVHRRLKEKLTEKKFLLVLDDVWNENQSKWEGVQKPLVFGAPGSRILVTTRSKEVVSTMRSKEHSLEQLGEDHCWKLFAKHAFQDDDTQPNPEYREIGMKIVKKCKGLPLALKTMGSLLYNKSSVAEWQTVFQSEIWEFSKERCDIIPALALSYIHLPSHLKACFAYCALFPKDYEFKKECLIQLWMTENFLHCRQQGKTAEEAGEQYFNDLLSRSFFQQLGEKKEVFVMHDLLNDLAKYVGGGIYFRWEVDQAEKVQKVTRHFSVELGQNQHFDGFETLCNTERLRTFMPASRSVNELSYRWHCNMSIHELFTKFKFLRILSLSHCSDLKEVPDSVVNLEDLRLLDLSCTAIKKLSEKICSLSHLQILKLNNCPNLEGVRYSTARRAQP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01277 390 Gene3D Ribonuclease Inhibitor 278 386 IPR032675 -
Lapu11g01277 390 PANTHER DISEASE RESISTANCE PROTEIN RP 5 382 IPR044974 GO:0006952
Lapu11g01277 390 FunFam Probable disease resistance protein At5g66910 68 153 - -
Lapu11g01277 390 SUPERFAMILY L domain-like 229 380 - -
Lapu11g01277 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 168 IPR027417 -
Lapu11g01277 390 FunFam Probable disease resistance protein At1g63360 154 240 - -
Lapu11g01277 390 Gene3D - 69 152 IPR042197 -
Lapu11g01277 390 PRINTS Disease resistance protein signature 105 119 - -
Lapu11g01277 390 PRINTS Disease resistance protein signature 314 330 - -
Lapu11g01277 390 PRINTS Disease resistance protein signature 9 23 - -
Lapu11g01277 390 Gene3D - 153 240 IPR036388 -
Lapu11g01277 390 Gene3D - 1 68 IPR027417 -
Lapu11g01277 390 Pfam NB-ARC domain 3 133 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01277 Lapu-Chr11 14873237 14876138 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01277 6 132 WRKY Transcription Factor Family AT5G45050 31.159 4.77e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01277 - - pvu:PHAVU_011G202900g 572.007