Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01266 ATGGCTGCTTCGGTTACAGGAAACGCGACCACAAACGCGAGCGCGGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGGAACATTCCCGCCGGTCGAATCAAGATGGAACTCTTCGCCGACATTGCGCCCAAAACCGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGAAAAGCCGGACTCCCAGTTGGTTACAAGGGTTGCCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGCGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCAATCTATGGACTTAAGCTTGATGATGAAAACTTTACTGCCAAACACACTGGCCCTGGCCTTCTGTCGATGGCAAATAGTGGACCAAATACCAACGGTTGTCAGTTTTTTATAACATGCGCAAAATGCGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGAGTGCTTGGAGATGGCCTTTTGGTTGTGAGGAAGATTGAGAACGTGGCAACCGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCAGAATGTGGTGAAATGTAA 591 0.4822 MAASVTGNATTNASAGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKLDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01266 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 64 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 153 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 169 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 95 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 31 196 - -
Lapu11g01266 196 Gene3D - 18 196 IPR029000 -
Lapu11g01266 196 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 78 95 IPR020892 GO:0003755|GO:0006457
Lapu11g01266 196 SUPERFAMILY Cyclophilin-like 19 196 IPR029000 -
Lapu11g01266 196 FunFam Peptidyl-prolyl cis-trans isomerase 18 196 - -
Lapu11g01266 196 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 32 195 IPR002130 GO:0000413|GO:0003755
Lapu11g01266 196 CDD cyclophilin_ABH_like 29 194 - -
Lapu11g01266 196 PIRSF Peptidylpro_ismrse 8 196 IPR024936 GO:0003755
Lapu11g01266 196 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 194 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01266 Lapu-Chr11 14736910 14742723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01266 25 193 U-box Gene Family AT5G67530 42.105 1.03e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01266 K09567 - gmx:100305521 385.956