Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01264 ATGGGGAGTAGAACTACTGGGGGTTTTGGTGTTGAAGATGACAAGGGAGCTGAAAGAGGAATGCCGAGCTTCAATTCTGAGTTACCCATTTCCAATTCAAGGTGTTCATGCCATGTTTGCTTACACCACTGGTACATGAGAAGTTTCTTGCTGTTTTTCGTTGAGATGTTTATTTGTCCTTTAATGATGTTTGAAAAAGAGACTAATGAAGATTCAGAGATGGTTGGTGGATTAAGTGGCGTAATTCTGACATGTGTGATATGCAGCTATGCAGAGGGGAGCACAGTTGATTCTTTTCGTGTTTCTGACTTTGGTGCATTTGATCAGCCATATCGCATAGAGGATGCTGTAGGCCTTAGTGGAAACCCAATTTACAACTCACTAAAAGTAAGTAGCCAAACAATTTCTCCGGGTTCTGTTCACATTAGTAGCCTTGGTCAGTTGCCAACTTCACTTGATAAAAGCCCATTGACGAATCAAACAGAGCCGCATAGGTTGCGATTACAAAAGGTTCAATCATCAAATCCTGGCACCATATTAGTTGGTAATACAGATAACCAGGAGGAGTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGTCGACACTGATGACAAGAATCAGCCGTTTGATAGAAATCAATCCCTTGCTGTTGTTTCTGATTCTAGTGACAGGTCGAAAGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCCCAGAACCGTGAAGCTGCAAGAAAAAGCCGTTTGAGAAAGAAAGCCTATGTCCAACAGTTAGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAATCTTCATATCAAGTTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATAAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGACACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCAAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACGCCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAGCTCCTCAAGCTGCTGGCAAATCAATTGGAACCTCTCACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAGTCTTCCCAACAAGCAGAAGATGCGTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACATTGTCCACCGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTCGGGACACTTGAAGGGTTCATTCGACAGGCTGATAATCTTCGCCAGCAGACTTTACAACAAATGCACCGTATTCTGACAACTCGCCAATCAGCTCGTGCCCTCCTTGCCATACATGACTACTTTTCGCGACTGCGTGCTCTCAGTTCACTCTGGCTGGCTCGCCCAAGAGATTGA 1569 0.4506 MGSRTTGGFGVEDDKGAERGMPSFNSELPISNSRCSCHVCLHHWYMRSFLLFFVEMFICPLMMFEKETNEDSEMVGGLSGVILTCVICSYAEGSTVDSFRVSDFGAFDQPYRIEDAVGLSGNPIYNSLKVSSQTISPGSVHISSLGQLPTSLDKSPLTNQTEPHRLRLQKVQSSNPGTILVGNTDNQEESAMADASPRTDISTDVDTDDKNQPFDRNQSLAVVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01264 522 SUPERFAMILY Leucine zipper domain 237 280 IPR046347 GO:0003700|GO:0006355
Lapu11g01264 522 CDD bZIP_HBP1b-like 237 289 - -
Lapu11g01264 522 Pfam Basic region leucine zipper 233 279 IPR004827 GO:0003700|GO:0006355
Lapu11g01264 522 FunFam BZIP family transcription factor 236 285 - -
Lapu11g01264 522 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 235 279 IPR004827 GO:0003700|GO:0006355
Lapu11g01264 522 Gene3D - 236 287 - -
Lapu11g01264 522 PANTHER TRANSCRIPTION FACTOR TGA9 177 521 - -
Lapu11g01264 522 SMART brlzneu 233 296 IPR004827 GO:0003700|GO:0006355
Lapu11g01264 522 Pfam Seed dormancy control 319 394 IPR025422 GO:0006351|GO:0043565
Lapu11g01264 522 Coils Coil 313 333 - -
Lapu11g01264 522 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 240 255 IPR004827 GO:0003700|GO:0006355
Lapu11g01264 522 MobiDBLite consensus disorder prediction 168 197 - -
Lapu11g01264 522 Coils Coil 256 283 - -
Lapu11g01264 522 ProSiteProfiles DOG1 domain profile. 302 519 IPR025422 GO:0006351|GO:0043565
Lapu11g01264 522 MobiDBLite consensus disorder prediction 168 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01264 Lapu-Chr11 14717834 14729564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01264 192 522 bZIP Transcription Factor Family AT3G12250 80.665 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu11g01264 DOG1 8.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01264 K14431 - gmx:100101881 778.474