Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01260 ATGAAGTTGGATCACCTGGGAAAGTTTCTGCCTGTTATTAAGAGCTTGTGTTATATACATGTTGTCAACACCTATCTGATCCAACCTGTTGTGACACATGGTCCTAGCATGCTTCCTACAATCGAATCAACAGTAGGTATGCTCTTAGTTGAAAAGATCTCACCTCGATATGGTAAAGTTGATCCTGGAGATATTGTAGTCTTGCTCGACCCTCAAAGACCTGGACGCATGATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGGGTTACATACAGTTCCAATCCTAAGACCTATGAAGTGGAGGGTGATAATTTTACACACATTCCCCATCCTGAGAACACGGATAAGCCTGAGACGGTTGTGGTTCCAAAGGGTAGCGTTTGGGTAGAGGGAGATAACAAGTCTAACAGCCGTGATTCTAGAACATATGGTCCTGTTCCTCTTGACCTTATTCGGGGCAAGGTATTCTGGAGGATATTACCATTTAACCGGTTTGGACCTTTCTGGGATAAATGA 519 0.4393 MKLDHLGKFLPVIKSLCYIHVVNTYLIQPVVTHGPSMLPTIESTVGMLLVEKISPRYGKVDPGDIVVLLDPQRPGRMMTKRVVGLEGDRVTYSSNPKTYEVEGDNFTHIPHPENTDKPETVVVPKGSVWVEGDNKSNSRDSRTYGPVPLDLIRGKVFWRILPFNRFGPFWDK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01260 172 CDD S26_SPase_I 28 156 IPR019533 GO:0004252|GO:0006465
Lapu11g01260 172 Gene3D Umud Fragment, subunit A 21 171 - -
Lapu11g01260 172 NCBIfam signal peptidase I 14 164 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lapu11g01260 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 25 41 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lapu11g01260 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 123 142 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lapu11g01260 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 78 90 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lapu11g01260 172 Pfam Signal peptidase, peptidase S26 16 159 IPR019533 GO:0004252|GO:0006465
Lapu11g01260 172 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 169 - -
Lapu11g01260 172 ProSitePatterns Signal peptidases I signature 3. 128 141 IPR019758 GO:0004252|GO:0016020
Lapu11g01260 172 SUPERFAMILY LexA/Signal peptidase 24 169 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01260 Lapu-Chr11 14686470 14688774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01260 37 169 MADS-box Gene Family AT1G29960 42.105 1.98e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01260 K09647 - gmx:100805997 239.195