Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01258 ATGGGAGTTGAACAAGAAGAGATGGAGGAGGAGAAAGAAGAACCAACCAACCACAACCTAAACCAAAACAAAAACCAAAACCTAAACCTAGACCAAAACAACCACCCTTCTAACTCTCTCCTCCTCCCAATCAAGGAAGAGAGTGGTGTGAGATTAAAGGGGTTTGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGACAGAGTGAAGAGAGATGAGTGGAGTGAAGGAGCAGTGTCAACCCTTCTAGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCTAGGCACGTGTCGGCACGTGCCAACTGCACCAAGTCGCCGAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAGTCTGCAACCGCAGATCATCCCTCCTCATGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACGGGCCCGCTCCTCTCCTCGCCGCCTCCTCCCACGGCGGCACCTTCCTCGGTAGAACCGCCGCAACAGTCGCCGCCGTCAGAGCCACTTGCAACTGCGCAGAACTCGCATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGGGTTAGCAAGAAAATCATGTGAGCATGATGTATCAAGCAAGAATCCATTGGACTCAGATAGCAGCACCCCTGCACTTTACAGCAAGAAGGAAGAGTTGAGAGGTAACAAGAGGAAGAAGAAGATGGTGGAGAACACAGGGAGAAGAAGGAAGGAGTACATGGAGATAGCAGAAAGCTTGAGATGGCTTGCAGAAGCCATGATAAGGTCAGAACAAGCAAGAATGGAGACAATGAAAGAGATAGAGAGAATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTCAAGAGAACTGAAATTATTGCCAACACACAATTAGAGATTGCTAGGATCTTTGCTAATGTCAACAAAGGTGTTGATTCATCTCTAAGAATTGGAAGAAGTTAA 1035 0.4937 MGVEQEEMEEEKEEPTNHNLNQNKNQNLNLDQNNHPSNSLLLPIKEESGVRLKGFGGGGGGGGGGGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESATADHPSSWPLYSRLDLLLRGTGPLLSSPPPPTAAPSSVEPPQQSPPSEPLATAQNSHGSNGVDDKLVKEDGLARKSCEHDVSSKNPLDSDSSTPALYSKKEELRGNKRKKKMVENTGRRRKEYMEIAESLRWLAEAMIRSEQARMETMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFANVNKGVDSSLRIGRS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01258 344 Gene3D - 76 141 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 130 144 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 165 240 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 52 74 - -
Lapu11g01258 344 FunFam Trihelix transcription factor ASIL2 76 141 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 19 40 - -
Lapu11g01258 344 Pfam Myb/SANT-like DNA-binding domain 73 160 IPR044822 -
Lapu11g01258 344 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 331 IPR044823 -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 206 229 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 117 152 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 168 191 - -
Lapu11g01258 344 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01258 Lapu-Chr11 14651044 14655416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01258 41 168 Trihelix Transcription Factor Family AT3G14180 35.115 7.37e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu11g01258 Myb_DNA-bind_4 2.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01258 - - gmx:100784245 415.231