Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01257 ATGGACCCTCAGCGCCGCACCGTTCGCACCCTCGTCTCGAAGCTCAGCTCCGTCTCCGAAGCCGCTCGCGTCGACGCTCTCTGCCAGCTTCGTCTCATGTCGAAGCAGGAACCGGAAACCCGACCCGTAATCGCCGAAGCTGGCGCAATCCCTTATATAGCCGAAACCCTCTACTCTTCCTCTCACACTTCCCAAGAGAACGCAGCGGCCACACTCCTCAACCTCTCCATCACGGAGAAGGAGCCTCTCATGTCGACACGAGGCGTCCTCGATGCGATCGCGCACGTGATCTCGCACCACGGCTCGACCTCATCGCCCGCCGCCGTTCAGTCTTCCGCCGCCGCCATACACAGCCTCCTCTCCTCCGTCGACGCCTACCGTCCCGTCGTCGGCGCCAAGCGCGAGATCGTGTACTCGCTCGTTGATATCCTCCGCTGCCACGTGTCCTCGCCTCCGCGCACGATCAAGGACGCGCTCAAGGCGCTCTTCGCCATCGCGCTCCACCCGCTCAACCGCGCTACGATGATCGGCCTCGGCGTGGTTCCCGCGCTTTTTTCGCTGGTTGTCAAGGACGGTAGGGTAGGCATTGTGGAGGACGCCACAGCGGTAATTGCGCAGGTTGCGGGATGTGAGGACGCCGCCGAGGCCTTCCCTAAGGCCTCCGGCGGCCTCGGCGTGCTCGTCGACCTCCTTGACCTCTCCACCGCCGCCAGCATGCGCACGAAGGAGAATGCCGTCTCGGCGCTCCTCAATCTGGTGCGATGCGGCGGGGAGAAGGTTGCCGCCGACGTGCGCGACGCGGTGGCGTTCGGAGCGCTGGACGGAATTAGGGATGTTAGGGACGGCAGCAGTAGCAAGGGGAGGATGAAGGCGGCGGAGTTGTTGAAGGTCTTGCTCGGTGAGAGCAATGGCAATGGCAGTGAGATGTTGAGTAGTGATAACTGTTCCTCGTTTGGTTCCTCGAGGAATCATGATTCGGATTGA 984 0.625 MDPQRRTVRTLVSKLSSVSEAARVDALCQLRLMSKQEPETRPVIAEAGAIPYIAETLYSSSHTSQENAAATLLNLSITEKEPLMSTRGVLDAIAHVISHHGSTSSPAAVQSSAAAIHSLLSSVDAYRPVVGAKREIVYSLVDILRCHVSSPPRTIKDALKALFAIALHPLNRATMIGLGVVPALFSLVVKDGRVGIVEDATAVIAQVAGCEDAAEAFPKASGGLGVLVDLLDLSTAASMRTKENAVSALLNLVRCGGEKVAADVRDAVAFGALDGIRDVRDGSSSKGRMKAAELLKVLLGESNGNGSEMLSSDNCSSFGSSRNHDSD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01257 327 Gene3D - 1 309 IPR011989 -
Lapu11g01257 327 MobiDBLite consensus disorder prediction 308 327 - -
Lapu11g01257 327 FunFam ARM repeat superfamily protein 2 304 - -
Lapu11g01257 327 SMART arm_5 210 254 IPR000225 GO:0005515
Lapu11g01257 327 SMART arm_5 37 77 IPR000225 GO:0005515
Lapu11g01257 327 SMART arm_5 168 209 IPR000225 GO:0005515
Lapu11g01257 327 SUPERFAMILY ARM repeat 7 305 IPR016024 -
Lapu11g01257 327 PANTHER U BOX DOMAIN-CONTAINING 7 298 - -
Lapu11g01257 327 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01257 Lapu-Chr11 14641632 14643636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01257 8 305 U-box Gene Family AT2G23140 32.441 7.42e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01257 - - gmx:100787115 518.079