Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01245 ATGTTCATCAAACACCACATTTTAATCTTCATCTCTTTCCCTTTTCTTTGTTCTTTTCTTCTTATTATGGCTATGGCTATGGCTTTGGAGACTCAGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGACAGAATGTTGATTGAGAGACTCCTTAAAACATCTTCTTTTAATGTTACTACAGTTGATTCTGCCACCAAGGCCTTGAAGTTTCTTGGTTTGGTTGAAGATGAGTTAAGGACTTTCGAAACTTCTGTTGCATCAGAAATTCATCAGGATGTAGATGTTAACCTGATTATAACAGATTACTGTATGCCAGGAATGACTGGTTATGATCTGCTGAGAAAAATTAAGGAATCTAAATCACTCAAAAACATACCAGTTGTGATTATGTCCTCAGAAAATGTGCCATCAAGGATTAACAGATGTTTGGAAGAAGGAGCAGAAGAATTCTTTCTGAAACCAGTTCAACAAGCAGATGTAAATAAGCTGAAGCCACATTTGATGAAATCAAGAACAAAAGAAGAACAAGACCAACCATTCAATAACAAAAGAAAGGATATGGAAGAAATTTATTCTCCAAACAAAACCAGATTAAGATGCAGCAGTTGA 612 0.3546 MFIKHHILIFISFPFLCSFLLIMAMAMALETQFHVLAVDDSLIDRMLIERLLKTSSFNVTTVDSATKALKFLGLVEDELRTFETSVASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLKPHLMKSRTKEEQDQPFNNKRKDMEEIYSPNKTRLRCSS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01245 203 MobiDBLite consensus disorder prediction 168 203 - -
Lapu11g01245 203 ProSiteProfiles Response regulatory domain profile. 34 169 IPR001789 GO:0000160
Lapu11g01245 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 33 182 IPR045279 GO:0009736
Lapu11g01245 203 CDD REC_typeA_ARR 35 164 - -
Lapu11g01245 203 MobiDBLite consensus disorder prediction 168 194 - -
Lapu11g01245 203 SMART REC_2 33 168 IPR001789 GO:0000160
Lapu11g01245 203 SUPERFAMILY CheY-like 32 169 IPR011006 -
Lapu11g01245 203 Pfam Response regulator receiver domain 35 161 IPR001789 GO:0000160
Lapu11g01245 203 Gene3D - 34 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01245 Lapu-Chr11 14446853 14448895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01245 25 180 Response Regulator Gene Family AT2G41310 66.667 3.99e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu11g01245 Response_reg 3.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01245 K14492 - gmx:100787436 333.183