LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g01218	ATGGGGAAGATAGAAAAACCAATAAAGAGCTTCACACAACCTTTTCTATCACCCTTCAAGTCATCTTTGATGGCTATCCTCCTGGTCATCATCATCCTCTTTTCCTTCTCCTCTCCTTCATTAGGTGAATCCTTCCAACCAAAAGACAATTTCCTGATTGATTGTGGAGCAGAAACTGCATCCACCCTCCCTGATGGAAGACAATTCAAAACAGACCCTCAAGCAAGTTCTTTCTTGAAAGCCAATGATGAGTACAAAGTCAGTGCAGATGATGTCAAAATGCCTTATCCTGTGTACAAAAGTGCAAGGATCTTCATCCAGGAAGCAAGATACTCCTTCCATTTGGTCCAGCCAGGTTATCATTGGGTTCGCCTTCATTTGTACCCCATCAAGAACAGCGTCTTTGATCTCCAGAAGGCCACTTTCTCAGTCTTCACAGATACCTATGTGCTCCTCCACAGCTTCAATGTTAACAACACTGACAAGCCAATCCTCAAGGAGTTCCTCATCAATGTAACTGAGCCTCAATTCTCTTTGTCCTTCATTCCCTTGAAGAACTCTGCTGCATTCATCAATGCCATTGAGGTTGTTTCAGCTCCTGATGAACTGATCTCCGACACAGCCACCGCCCTTTTCCCGGTTGGCGATTTCGCCGGCGTCACGGCTTATAGCTTGCAGCCTGTTTTCAGGGTCAACAATGGAGGGCCTCTCATCACCTCATCAAATGACACCCTTGGGAGGGCTTGGGAATCTGATGAGCCTTTCCTCACAAACAAGAACTTGGCCAAGAGTGTCTCGGTGGCTACCACTGCGGTTAAATTCCCCCAACACAATCCTGCAATCTCCCCTCTGATTGCACCACAAACCGTTTATGCTTCTGCCACTGAGATGGCTGATGCTGGTGTTAATCAGCCAAATTTCAATGTCTCGTGGAAATTTGATGTGGACACTTCTTTTAGCTACCTTGTTAGGCTTCACTTCTGTGACGTTGTTAGCAAAGGGCTCAATCAACTCTACTTTAATGTGTATGTTAATGGGAGAACGGCAATCTCTAACCTTGATTTATCAGCACTAACTGGTGCCTTGTCAACCCCATATTACAAAGACATTGTGGTGAATGCAACATTGATGTCCGAGGGACTATCAATTCAGGTTGGTCCAGCGGCTGCTGTTGGTGGAAGTGCCAATGCCATTGTGAATGGTATAGAGGTCATGAAGATGAGCAACTCTGTGAATAGTTTGGACGGAGAATTTGGAGTTGATGGAAGAAGTCTTAATGGTTCTAACCGCGGCACAGTGGCCGCAGTTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGCCTTGGAGCTATGGTGATCAAGTGGCACAAGAGGCCTCAAGACTGGCAAAAGAGGAACAGCTTCTCTTCATGGTTGCTGCCTCTGCATGCTGGTGACACAAGCTTCATGAGCAGCAAGAACTCAATGGGAAAGAGCAACTTCTTCTCCTCATCAATGGGATTAGGCCGGTACTTCTCCTTTGCTGAACTTCAGGAGGCAACCAAGAACTTTGACTCAAAGAACATCATTGGTGTTGGTGGATTTGGTAATGTGTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCCGTCAAGAGAGGAAACCCTCAATCAGAGCAAGGCATCAACGAGTTCCAGACTGAAATCCAGATGTTGTCCAAGCTCAGGCACAGGCACTTGGTGTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATTCTGGTTTATGAGTACATGCCCAATGGACACTTCAGAGACCATCTTTATGGAAAGAACATGCCTCCTCTCTCATGGAAGCAAAGGCTAGAGATCTGCATTGGATCAGCTCGTGGTCTTCACTACCTTCACACAGGCACAGCTCAAGGCATTATTCACCGTGATGTCAAGACCACCAACATCTTGCTTGATGAGAATTTGACAGCCAAGGTTTCTGATTTTGGACTTTCCAAGGATGCACCAATGGGGCAGGGTCATGTTAGCACTGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAACTGACAGAAAAGTCTGATGTGTACTCATTTGGGGTGGTACTGCTTGAGGCCCTGTGTGCAAGGCCAGCCATCAACCCTCAGTTGCCCCGTGAACAAGTAAACTTGGCCGATTGGGCGATGCAATGGAAGAGGAAGGGCTTGCTTGACAAGATCATAGACCCTCTCCTGATTGGATCCATCAATCCTGAATCTATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGACCATGGAGTGGATAGGCCTTCAATGGGAGATGTTTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGGAAAGGCTGAGGATGAGACAAAGTTATCTGCAGCAGTCCCTACTCCTGCTGCTCCTACTTCACCACATGTCCCACCAGCACCTTCCACTCCTTCTGGTGACTCTCCGGCGACGCCGGCAGCAGCCGTGGCGGCGCCACGTACAGAAGTGAACAATTCTACACCAGAAGTGCGTTCTATTGATGACCATTCTGGAACTGCAATGTTTGCTCAGTTTGGCAATCTCAATGGCAGGTGA	2631	0.4724	MGKIEKPIKSFTQPFLSPFKSSLMAILLVIIILFSFSSPSLGESFQPKDNFLIDCGAETASTLPDGRQFKTDPQASSFLKANDEYKVSADDVKMPYPVYKSARIFIQEARYSFHLVQPGYHWVRLHLYPIKNSVFDLQKATFSVFTDTYVLLHSFNVNNTDKPILKEFLINVTEPQFSLSFIPLKNSAAFINAIEVVSAPDELISDTATALFPVGDFAGVTAYSLQPVFRVNNGGPLITSSNDTLGRAWESDEPFLTNKNLAKSVSVATTAVKFPQHNPAISPLIAPQTVYASATEMADAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDVVSKGLNQLYFNVYVNGRTAISNLDLSALTGALSTPYYKDIVVNATLMSEGLSIQVGPAAAVGGSANAIVNGIEVMKMSNSVNSLDGEFGVDGRSLNGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNFFSSSMGLGRYFSFAELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNMPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENLTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLIGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETKLSAAVPTPAAPTSPHVPPAPSTPSGDSPATPAAAVAAPRTEVNNSTPEVRSIDDHSGTAMFAQFGNLNGR*	877

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g01218	876	CDD	STKc_IRAK	523	787	-	-
	Lapu11g01218	876	FunFam	receptor-like protein kinase FERONIA	480	592	-	-
	Lapu11g01218	876	FunFam	Receptor-like protein kinase FERONIA	224	409	-	-
	Lapu11g01218	876	SUPERFAMILY	Protein kinase-like (PK-like)	500	784	IPR011009	-
	Lapu11g01218	876	ProSitePatterns	Protein kinases ATP-binding region signature.	523	545	IPR017441	GO:0005524
	Lapu11g01218	876	Pfam	Malectin-like domain	53	407	IPR024788	-
	Lapu11g01218	876	MobiDBLite	consensus disorder prediction	816	831	-	-
	Lapu11g01218	876	Gene3D	Phosphorylase Kinase; domain 1	479	592	-	-
	Lapu11g01218	876	FunFam	Receptor-like protein kinase FERONIA	593	806	-	-
	Lapu11g01218	876	FunFam	Putative receptor-like protein kinase	50	200	-	-
	Lapu11g01218	876	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	637	649	IPR008271	GO:0004672\|GO:0006468
	Lapu11g01218	876	MobiDBLite	consensus disorder prediction	800	863	-	-
	Lapu11g01218	876	SMART	serkin_6	517	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g01218	876	Gene3D	-	225	409	-	-
	Lapu11g01218	876	Gene3D	-	50	200	-	-
	Lapu11g01218	876	Gene3D	Transferase(Phosphotransferase) domain 1	593	812	-	-
	Lapu11g01218	876	ProSiteProfiles	Protein kinase domain profile.	517	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g01218	876	PANTHER	OS07G0166700 PROTEIN	503	793	IPR045272	GO:0004714\|GO:0006468
	Lapu11g01218	876	Pfam	Protein tyrosine and serine/threonine kinase	520	714	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g01218	Lapu-Chr11	14201486	14204116	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g01218	45	876	Receptor kinase-like Gene Family	AT4G39110	68.138	0.0	1197

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lapu11g01218		Malectin_like	3.3e-36	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g01218	-		-	gmx:100790759	1482.62