Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01197 ATGGCTCAGAAGGCCGAGAAAAACGACACCGACTTCAAGGTTCCCGAACCAATCACCCCCTGCGCCACAACAACCACCGCCGCCGCTGCCGCTTCCGCTACCGCCGCAACATCCATTTCCGAACCTTCTAGATTCTTCGACGCTGCCACGCCAACCACCTCGTCGCGTTCGCCGAAGCGCTCGCTTCCTCTAGATGACGCTGCGAGCGCCGACCGGACGGCGGCGTCGGAGCCGAAGCGCGCGGTCAACAGGTGCTCCGGATGCAGGCGGCGCGTCGGGCTGACCGGATTCCGCTGTCGGTGCGGTGACCTCTTCTGCGCCGAGCACCGGTACACCGACCGTCACGACTGCTCCTACGACTACAAGGCCGCCGGGAGAGAGGCCATCGCGAGGGAGAATCCCGTCGTGAAGGCCGCGAAGATCGTCAAGGTCTGA 435 0.6483 MAQKAEKNDTDFKVPEPITPCATTTTAAAAASATAATSISEPSRFFDAATPTTSSRSPKRSLPLDDAASADRTAASEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKAAGREAIARENPVVKAAKIVKV* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01197 144 PANTHER AN1-TYPE ZINC FINGER PROTEIN 30 143 - -
Lapu11g01197 144 FunFam Zinc finger AN1-type containing 6 60 140 - -
Lapu11g01197 144 MobiDBLite consensus disorder prediction 32 60 - -
Lapu11g01197 144 Pfam AN1-like Zinc finger 85 122 IPR000058 GO:0008270
Lapu11g01197 144 SUPERFAMILY AN1-like Zinc finger 72 138 IPR035896 -
Lapu11g01197 144 ProSiteProfiles Zinc finger AN1-type profile. 79 125 IPR000058 GO:0008270
Lapu11g01197 144 SMART AN1_Zf_4 85 122 IPR000058 GO:0008270
Lapu11g01197 144 Gene3D - 54 140 IPR035896 -
Lapu11g01197 144 MobiDBLite consensus disorder prediction 32 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01197 Lapu-Chr11 13971123 13971557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01197 57 144 C2H2 Transcription Factor Family AT3G52800 52.273 5.02e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01197 - - gmx:100794830 207.223