Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01185 ATGGCTTCTTTAACTTTTCTTTATTCCTATTTTCTTCTGCTAATTGTTCTCCTCTTTCTCTCATCTTTGTTCAGTGCTACTTCTTCAAACTGTGATGGTTCTAGTGTGAGCTTAAACTCCTCTCTACACACCAATGATTCAATTCCTTGGACTTCACCTTCTGGAAGCTTTGCCTTTGGTTTCCAAACAGTTCTATACGACAACAAGGAGTTCATGTCCGTGCTTGGAGTTTGGTTTGCCAATGACCCCAACAAAACCATGGTATGGTATGCAAAGCCAAAACAAACTCATCTTTTTCCATTAGGGTCAACAATGAGACTCACAAGCGAAGGAATTGTAGTGTCTGATCCAAAGGGTCATGAAATGTGGCACCGTCCTGAAAACAACACTGTTGCTTTGGTATCATGTGCTTCTATGCTAGACAATGGAAGTTTTGTGCTGGTGGATGAGGGTGGGAAGAAGGTCTGGGAGAGCTTTGAGGAGCCCACAGATACCATTTTGCCTGGTCAGAATTTGGATAAGCCCAAAAGCTTCAGAGCACGCCAATCTGAAACCAGTTTTGATGATGGGAATTTTGAACTCAGTTGGCAGAACGATAGCAATTTGGTTCTTTACTATTCTCCAAAATCAAGCGATGATAATGACGATGAAAACTCTCAATCTCCAACGCACGAGGCTTACTGGGCCACTGGAACTTTCCAAACTAAATCACAGCTTTTCTTCGATGAGTCTGGACGCATGTACATAAAAAATGAAACGGGTACAGTGATCAGTAAAATCACACATGGTGGATCAGAAGAGTTCATTTACATGGCTAGAATTGACCCTGATGGAGTTTTCAGACTATATCGGCACCCAAAAGGTGAGCACACAGCTGTTGCTAATAGCTGCAGTTCGAGGTGGTGGAGTATGGAGCAACAACATCCAGATGATATTTGCCTTTCCTTCACGAAGCAAACTGGGAATGTTATCTGCGGTTTTAACAGCTACTGTGTCACCATCAATGAGAAGACTAATTGTGAGTGCCCGGATCATTATTCTCCTTTTGAACATGACAATCTCACAGGTTGTAGACCAGATTTTCCACTGCCTAGTTGCAACAAAGACGGGTGGGAGCAGAATAAGGATCTTGTAGATTTCAGAGAGTATAAAAATTTGGACTGGCCTCTCTCAGACTATGACAGGTTGATTGGAACTGCAATGGACAAGGATTTGTGTAGACAAAAGTGCCTTGAGGATTGCTTTTGTGCTGTGGCCATATATGGTGACGGCAGCTGTTGGAAGAAGAAGTATCCTTTGAGCAATGGAAGGAAGCACCTTAATGTGACTAGAATAGCTCTTGTCAAGGTGCCTAAAACAGATTTAAACAAGGGAGGAAAAGAACAGACCACACTTGTGCTTGTGGTATCAATACTCCTAGGAAGCTCAGTGTTCCTCAATGTCTTTCTTCTTGTTGCTCTGTTTGCTGCTTTTTTCATTTTCTACCACAAGAGGCTTTTGAATCGTCCGAACTTGTCATTTGGCACAATAAGCTACTTTACATACAAGGAGCTTGAAGAAGCAACCACAGGGTTCAGACAAATGTTGGGTCGAGGTGCTTTTGGAACGGTTTATAAAGGGGTGTTGACATCAAACACGAGCAGGTATGTAGCGGTGAAGAGGCTTGACAAGGTTGTGCAAGAAGGTGAGAAGGAGTTCAAAACAGAAGTGAGTGTGATTGCAGAAACCCACCACAGGAACTTGGTTCGTTTGTTTGGTTACTGTGATGAAGGGGAGCATCGTCTTCTGGTGTATGAGTACATGAGCAATGGTTCATTGGCTGGCTTTCTCTTTGGGATCTCAAGGCCTCATTGGAACCAAAGAGTGCAAATTTCTTTGGGGATTGCAAAGGGCCTCACGTATTTGCATGAAGAGTGCAGCACTCAGATAATTCACTGTGACATAAAGCCTCAGAATATTCTCCTAGATGAGTTGTTCACTCCTAGGATTGCTGATTTTGGGTTGGCAAAGCTGTTGTTGGCAGAGCAAACTAAAACTGCTAGGACAGGTTTGAGAGGGACAATTGGTTACTTTGCACCTGAATGGTTTAGGAAAGCTTCGATCACAACCAAAGTAGATGTTTACAGCTTTGGAGTGGTGCTGTTAGAGATCATGTGTTGCAAGTCAAGTGTTGCATTTGCGTTGGAAAGTGAAGAAGAGGCACTCATAGATTGGGCTTATCGTTGTTATAGCCTAGGGAAGGTGGCTAAATTGGTAGAAAATGATGAGGAGGCAAAGAATGACATAAAGAGGGTGGAGAAGCATCTGATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCACTCAGACCCTCCATGAGAAAGGTCACACAAATGCTTGAGGGTGTTACAACAGTTTCTGTGCCACCTTGCCCTTCTGTGTTCACTTCACCATCTTTGTAA 2442 0.4312 MASLTFLYSYFLLLIVLLFLSSLFSATSSNCDGSSVSLNSSLHTNDSIPWTSPSGSFAFGFQTVLYDNKEFMSVLGVWFANDPNKTMVWYAKPKQTHLFPLGSTMRLTSEGIVVSDPKGHEMWHRPENNTVALVSCASMLDNGSFVLVDEGGKKVWESFEEPTDTILPGQNLDKPKSFRARQSETSFDDGNFELSWQNDSNLVLYYSPKSSDDNDDENSQSPTHEAYWATGTFQTKSQLFFDESGRMYIKNETGTVISKITHGGSEEFIYMARIDPDGVFRLYRHPKGEHTAVANSCSSRWWSMEQQHPDDICLSFTKQTGNVICGFNSYCVTINEKTNCECPDHYSPFEHDNLTGCRPDFPLPSCNKDGWEQNKDLVDFREYKNLDWPLSDYDRLIGTAMDKDLCRQKCLEDCFCAVAIYGDGSCWKKKYPLSNGRKHLNVTRIALVKVPKTDLNKGGKEQTTLVLVVSILLGSSVFLNVFLLVALFAAFFIFYHKRLLNRPNLSFGTISYFTYKELEEATTGFRQMLGRGAFGTVYKGVLTSNTSRYVAVKRLDKVVQEGEKEFKTEVSVIAETHHRNLVRLFGYCDEGEHRLLVYEYMSNGSLAGFLFGISRPHWNQRVQISLGIAKGLTYLHEECSTQIIHCDIKPQNILLDELFTPRIADFGLAKLLLAEQTKTARTGLRGTIGYFAPEWFRKASITTKVDVYSFGVVLLEIMCCKSSVAFALESEEEALIDWAYRCYSLGKVAKLVENDEEAKNDIKRVEKHLMVAIWCIQEDPSLRPSMRKVTQMLEGVTTVSVPPCPSVFTSPSL* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01185 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 805 - -
Lapu11g01185 813 Gene3D Transferase(Phosphotransferase) domain 1 601 801 - -
Lapu11g01185 813 CDD PAN_AP_plant 387 451 - -
Lapu11g01185 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 184 285 IPR036426 -
Lapu11g01185 813 CDD STKc_IRAK 529 795 - -
Lapu11g01185 813 MobiDBLite consensus disorder prediction 207 226 - -
Lapu11g01185 813 Coils Coil 748 768 - -
Lapu11g01185 813 ProSitePatterns Protein kinases ATP-binding region signature. 529 553 IPR017441 GO:0005524
Lapu11g01185 813 FunFam S-receptor-like serine/threonine-protein kinase 497 600 - -
Lapu11g01185 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 232 IPR036426 -
Lapu11g01185 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lapu11g01185 813 SMART blect_4 33 162 IPR001480 -
Lapu11g01185 813 SUPERFAMILY Protein kinase-like (PK-like) 506 794 IPR011009 -
Lapu11g01185 813 Gene3D Phosphorylase Kinase; domain 1 495 600 - -
Lapu11g01185 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 801 - -
Lapu11g01185 813 Gene3D - 162 308 IPR036426 -
Lapu11g01185 813 ProSiteProfiles Protein kinase domain profile. 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01185 813 ProSiteProfiles Bulb-type lectin domain profile. 33 160 IPR001480 -
Lapu11g01185 813 Gene3D - 30 161 IPR036426 -
Lapu11g01185 813 Pfam D-mannose binding lectin 86 182 IPR001480 -
Lapu11g01185 813 PIRSF SRK 4 812 IPR024171 GO:0004674
Lapu11g01185 813 Pfam Protein kinase domain 527 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01185 813 SMART serkin_6 523 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01185 Lapu-Chr11 13875229 13877998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01185 493 795 Receptor kinase-like Gene Family AT1G60800 41.479 2.07e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu11g01185 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01185 - - gmx:100796323 1335.47