Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01178 ATGGATGCCACTCACTCCATGTTCTGTAACAATGATCTGGTTAACCCTCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTCGTGTCACATGTCTTCAACGTTGTGTTTAGGACTGTGGGTCAACCTGGATCAATTGCACAGATTCTGGCTGGGTTGGTGCTAGGTCCAATGTCACACATTGCGTATATAAAGGCTACATTCTTTCCTGCTAGTTCAATAAATTACTATGAAGTTGTGAGCTTCTTCTGTCGCATACATTTCATGTTTTTGTTTGGGTTAGAGATGAATATTCACTACACAATGCGCAATCTGCGTAGGGTCAGCTTTGTAGCCTGTGGTGGTGCCATAATGGGTGGTGTTTTTGGTCTATCTGTCTCATTTTACTTGCATCAAGAGCTGAACACCATTGACAATGCCCCTTTGTACTATTTTTCCATGATCATCATGCTAGTGGTGTCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCAGAGATGAGGTTTGCAGCATCAGACGTGGGGCGAATGGCGGTGTCCTCTGCGTTGATAACAGAAATGGGGTGTTTGTTGTTCTTCAATGTGATGGTTAACTGGAGGAAACAAAATCACATTTCTTCTGGTATAGGCTGCCTTATAATCACTGCCTTGGTGGTCTACATAAACAGGCACTTGGCAGTTTGGTTGAACACAAGAAATACAAACCAGAAGTACCTCAAGGCTCCTGAGTTGTTACTCATTCTGTTCCTGCTTCTTACTGGCTCAATGATAATAGAGATTTGTGGTTACAACAGTATTATCAGTTGTTTCATAGTTGGTTTGTTGTTCCCCAAGGAAGGAAAAACAGCTAGAACATTGCTGCACAAACTTGGTTATTCTATTTACAACTTTGTGCTTCCAGTTTACTTTGGCTACTTAGGTTTGCAGTGTGACCTGATAAATGTCTTCAGGAGCTTGGAGCGTGCGGCCAATATGGCCATATTGATATTATTGAGCATTGGAAGCAAGCTTGGTGGAACTCTTTTAGTTTGCCGCTACCTTAAAATCCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCCGATCTTCTATTCATTGGTGCAGCAGCAAAGCAAGTAATTACTTTTGATTCAGAAGCGTACAATGTTCTGTTGGTGTCAATAGTACTTAACACAATAATATCAGGAATAATTGTGGCTTTTCTAGTGAGAGGGGAAGACAAAATGTTTACAAACAACTACACTGCAATTGAACCACAACAAATGGAAGATGAGCTCCGAATTCTGGCTTGTGTGTACGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTGCTAGCAATACATGGCTCTAGAGCATCGCCATCTACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACCTGTTATACCACGAGAAAGAAAATGCTGACCTTAGCGACGATGAGGACTATGGTGGCAATGATGTGGTGGAAATCAACAATTCTTTGGATAGCTTCACTTCAGACACAAAGATTCTAGTCCACCAACGAAGGGCAGTGTCTTCTTTCCCGTCCTTGTATGAAGATGTGTGCAATGAAGCAGAAGACCTCCAAGTGTCAATTGTGCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTGGAAAGTGGAAAAGAGGGTATAAGGATCACTAATCAGAAGGTGCTGAGACATGCCCCTTGTTCAGTTGGTGTCATAGTAGAAAGAGGCCTTGCAAGGGTACCTGGCTTCTCACAACTAGTAGCATCTGAGGGCATACAAAATGTCGCAACACTTTTCTTCGGTGGCCCTGATGACCGTGAGGCTATTTCATGGAGCCTACGCATTTCAGGAAGTCCACGTGTGAACTTGACAATCATAAGATTTTTGTTGAGTTCTTCATCACATAACGAACTGATTGAGAGTGGACAATCAGAGGACAAGGAGATCTTGATGTCACTGTCTGGAGAGGAGACTGTGAACGAGATTGACAACACCTTCATGGTTGACTTCTACAACAGGTATGTGACTTCAGGCCAAATAGGGTATGTGGAAAAGTTTGTGAACGATGGAGCACAAACAGTGGATTCTTTGAAAGAGATAGGAGACATGTACTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGACAGAGTTCACTCACAATTGGTATGAGCGATTGGGAAGAGTGTCCAGAACTGGGAACAGTTGGTGATGTCTTGGCCTCTTCAGACTTTGATATTCATGGCTCAGTTTTGATAGTTCAACAACATAGAGATGTCAAGAAAGGCCTATTGCATGATTAG 2349 0.4278 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHVFNVVFRTVGQPGSIAQILAGLVLGPMSHIAYIKATFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTMRNLRRVSFVACGGAIMGGVFGLSVSFYLHQELNTIDNAPLYYFSMIIMLVVSYTSSPMVIRLAAEMRFAASDVGRMAVSSALITEMGCLLFFNVMVNWRKQNHISSGIGCLIITALVVYINRHLAVWLNTRNTNQKYLKAPELLLILFLLLTGSMIIEICGYNSIISCFIVGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFRSLERAANMAILILLSIGSKLGGTLLVCRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDSEAYNVLLVSIVLNTIISGIIVAFLVRGEDKMFTNNYTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSRASPSTTYLMHLIELVKKIKSNLLYHEKENADLSDDEDYGGNDVVEINNSLDSFTSDTKILVHQRRAVSSFPSLYEDVCNEAEDLQVSIVLLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLARVPGFSQLVASEGIQNVATLFFGGPDDREAISWSLRISGSPRVNLTIIRFLLSSSSHNELIESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVNDGAQTVDSLKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDVKKGLLHD* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01178 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu11g01178 782 Gene3D - 19 418 IPR038770 -
Lapu11g01178 782 PANTHER CATION/H + ANTIPORTER 10 773 - -
Lapu11g01178 782 FunFam Cation/H(+) antiporter 1 19 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01178 Lapu-Chr11 13823653 13826434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01178 7 774 Antiporter Super Family AT1G16380 39.615 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01178 K26731 - gmx:100804522 1426.38