Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01168 ATGTCGCTCAATATGAAAACCCTAACCCAAGCATTGGCCAAAACCGCCGCGGTCATAGAGAAGACAGTCACCACCACGGTGCAGGAGGTCACGGGCCCCAAGGCACTTCAGGACTACGACCTCCTCGACCAGATCGGCTCCGCTGGGCCCGGCCTCGCCTGGAGGCTCTACTCGGCCCGGGCCCGTGATCCCGCGCGCCAGCATCAATACCCCGTTGTCTGCGTCTGGGTGTTGGACAAGCGCTCTCTCTCCGAGGCCCGAATGCGCGCGGGCCTCACCAAGGCCGCCGAGGATTCCTTTCTGGATTTGATTCGGGCAGATGCCGCCAAGCTCGTTCGCCTCAGGCATCCCGGGGTGGTTCACGTCGTCCAGGCCCTCGACGAGAGCAAGAATGCAATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACTCTTGCCATTGTTGACAACATTCCTGTTCTTCCTAAAGATCTCAGGGGAATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTGGACTTTCTCCACAACCATGCTCATCTTATTCATCGAGCAATATCACCCGAGAACATTCTTATCACCTTGAGTGGAGCCTGGAAGCTTGCGGGATTTGGTTTTGCAGTTTCTGCTACTCAGACCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTTGAAGACTCTATTTTGCCACTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTGAGGAGCACTGGGTCTTCAGCTGGGTGCTCATCTGATATATTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCCCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGCGATGCATTCTCATCTATCCCATCAGAACTGGTTCATGACCTGCAAAGGATGCTTTCTCCGAATGAGTCTTCCAGGCCAACAGCAATGGATTTTACAGGATCACCATTTTTTCGGCATGACACTAGGTTGCGTGCCTTACGCTTCCTTGACCACATGCTCGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGGTACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTCTAACCATTGCAGAGTCTCAGGACAAGAACGATTTTGAGCAATATACACTTCCAGCCCTTGTCCCTGTGTTGAGTACTGCTGCTGGTGAGACACTGTTACTACTTGTGAAGCATGCTGATCTTATAATAAACAAGACTAGTCAAGAGCATTTAATTTCTCATGTTCTTCCAATGATTGTTCGGGCCTATGATGACAATGATGCACGTTTGCAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTGCCAAACAATTAGATGCCCAGCTTGTCAAACAAGTGGTTTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCGGCGGTTAGAGTCAACGCGTTGCTCTGCCTAGGAGACATGGTTAACCGACTTGATAAACAATCTGTCTTGGACATCTTGCAAACAATTCAACGCTGTACTGCTGTTGACCGTTCCCCCCCAACCCTTATGTGTACCCTGGGGGTTGCAAATTCTATTTTCAAGCAGTATGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTATGCCTCTCCTGTCTGCCCAACAATTGAATGTCCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGTTGTGACTGATTCTGGAATGCCAGAGGTAAAACGGTCTCCGGTGGTTAATGGTCTTCAATCTGAAGCCCTGCGGACAAGCAGCAGTTCTGTGCCTGCTTCAACAAAAGGCAGCTCCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAGCGCACTGCCCCTTCTACCGATAATTCTATTGATGCAGCCAATCCATCTATGGCAGGCAGCCCTGTGGGTCAAGTAACATCTTTACAAAAGCATTTGTCCTTAGCTGCTTTATCTGCTAAGGAAACAACCAAGTCATGCCCCTCCGTAGAAGTAGAATGGCCACCTCGGGCATCTCCTGGTGTTACCCCACAATTTAGTGATACTGAAAAGCAGACAATAGGAGCAGGAACTTCATCCACATCTAATCTTGAATCTGATGATCCTTTTGCCGACTGGCCTCCACGTCCTAATGGCTCAGTATCAGGTGGATCTGGAATATCTAACAACAGTACTTCTGGAATGCCACCGAACATTGGGTTTAATTCAATGACAAACATCTCGAGCAATATTGGTCCCCAAACTAGCATGAGTTGGTCCGTTAGTTCCCAAAGTTCTGCAGAGCCCATTAGTTTGAACTCAAGGACTAGTTCTACAGTGGGTGGCCTGAATAGTAGTAGCCTGAATAGTGGCCTTGGGTCTCAGAATTCTCTTGGGTTCCTAAAACAAAGTCATGCTTTTCCAGCATCGAATGTTTCATACAATAATGTTCAGTCAACAGCAACAGATCTAGGATCAATATTTTCGTCCAACAAGAATGAACACATTGCGCCTAAACTTGCACCACCCCCTTCATCTGCAGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGCGTCAACCACTAGATCCTCTCACTCTAAGTCACACGCTGAGCAGCCACCCCTTTTGGATTTGTTAGGGTAA 2799 0.4762 MSLNMKTLTQALAKTAAVIEKTVTTTVQEVTGPKALQDYDLLDQIGSAGPGLAWRLYSARARDPARQHQYPVVCVWVLDKRSLSEARMRAGLTKAAEDSFLDLIRADAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASAANTLAIVDNIPVLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENILITLSGAWKLAGFGFAVSATQTSGDSSNLQPFHYAEYDVEDSILPLQPSLNYTAPELVRSTGSSAGCSSDIFSFGCLAYHLIARKSLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVHDLQRMLSPNESSRPTAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQYTLPALVPVLSTAAGETLLLLVKHADLIINKTSQEHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLAKQLDAQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKQSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLSAQQLNVQQFAKYMLFVKDMLHKIEEKRGVVVTDSGMPEVKRSPVVNGLQSEALRTSSSSVPASTKGSSSWDEDWGPKTKRTAPSTDNSIDAANPSMAGSPVGQVTSLQKHLSLAALSAKETTKSCPSVEVEWPPRASPGVTPQFSDTEKQTIGAGTSSTSNLESDDPFADWPPRPNGSVSGGSGISNNSTSGMPPNIGFNSMTNISSNIGPQTSMSWSVSSQSSAEPISLNSRTSSTVGGLNSSSLNSGLGSQNSLGFLKQSHAFPASNVSYNNVQSTATDLGSIFSSNKNEHIAPKLAPPPSSAVGRGRGRGRGAASTTRSSHSKSHAEQPPLLDLLG* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01168 932 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 38 924 - -
Lapu11g01168 932 Pfam Protein kinase domain 105 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01168 932 MobiDBLite consensus disorder prediction 712 799 - -
Lapu11g01168 932 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Lapu11g01168 932 MobiDBLite consensus disorder prediction 673 696 - -
Lapu11g01168 932 Gene3D - 348 621 IPR011989 -
Lapu11g01168 932 SUPERFAMILY ARM repeat 347 608 IPR016024 -
Lapu11g01168 932 CDD PK_SCY1_like 45 346 - -
Lapu11g01168 932 MobiDBLite consensus disorder prediction 733 758 - -
Lapu11g01168 932 MobiDBLite consensus disorder prediction 641 664 - -
Lapu11g01168 932 MobiDBLite consensus disorder prediction 772 799 - -
Lapu11g01168 932 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01168 932 MobiDBLite consensus disorder prediction 633 696 - -
Lapu11g01168 932 Gene3D Transferase(Phosphotransferase) domain 1 161 347 - -
Lapu11g01168 932 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01168 932 MobiDBLite consensus disorder prediction 885 932 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01168 104 349 CBL-interacting serine-threonine protein kinases AT2G26980 23.600 2.12e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lapu11g01168 Pkinase 1.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01168 K17541 - gmx:100796211 1594.33