Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01154 ATGATGAGAACGAGGGTTTTGCAGTTGTGTTATTCCATGGCTTCCTTGTGTACATGCAGAGCTCCTCTGCAGGTAGAATTGGCCAAGTTCTGGATTTTGAGAAACAGGAGTGGTGGGAGTAGTTTGCAGGTGCAGTGCTCTCGGAGACCCCAGAGAGCGCCCCCTGGAGTTGACACCAGAATTCACTGGGACAACGAGGATGAAGGGTGGATTGGAGGCGGAGATAAAGATAAAGATAAAGACACCAAATCCAGAAGCATGTTCGCTGATGATGATGACTTGGCAGATTTGCTCCTCAACTCTTCTTTAGGCTCTCATTACGAATTCTTAGGAGTATCACCCGATGCGGATTTAGAAGAAATCAAAGTTGCTTATAGGAAACTATCGAAGGAGTATCATCCCGACACCACTTCCCTCCCTCTGAAAAGTGCCTCGGAAAAATTCATGAAACTGAGAGAGGTTTACAACGTTCTGAGCGATGAAGAGAGTCGAAAATTTTATGATTGGAGCCTTGCTCAGGAGGCTGCAAGCCGGCACGCAGAGAAGATGAAAATGAAATTAGAGGATCCTCGGGAGCAACAACTCAGGAACTGGGAACCTGTTCCCGACATGGTCGACCGCCTTGGTGGAAGGAATATGAAGCTTAGTGATCAGGCGGTCTCTGCCATCACTATTGATGTTTTTATCATCATTTTTTCCATCTGTTGTATCATTTACGTCATCTTCTTTAAAGTACCATATTACTACTAG 750 0.4547 MMRTRVLQLCYSMASLCTCRAPLQVELAKFWILRNRSGGSSLQVQCSRRPQRAPPGVDTRIHWDNEDEGWIGGGDKDKDKDTKSRSMFADDDDLADLLLNSSLGSHYEFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKSASEKFMKLREVYNVLSDEESRKFYDWSLAQEAASRHAEKMKMKLEDPREQQLRNWEPVPDMVDRLGGRNMKLSDQAVSAITIDVFIIIFSICCIIYVIFFKVPYYY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01154 249 PRINTS DnaJ domain signature 107 125 IPR001623 -
Lapu11g01154 249 PRINTS DnaJ domain signature 143 163 IPR001623 -
Lapu11g01154 249 PRINTS DnaJ domain signature 125 140 IPR001623 -
Lapu11g01154 249 FunFam DnaJ homolog subfamily C member 4 95 192 - -
Lapu11g01154 249 CDD DnaJ 106 160 IPR001623 -
Lapu11g01154 249 ProSiteProfiles dnaJ domain profile. 105 171 IPR001623 -
Lapu11g01154 249 ProSitePatterns Nt-dnaJ domain signature. 148 167 IPR018253 -
Lapu11g01154 249 SMART dnaj_3 104 163 IPR001623 -
Lapu11g01154 249 SUPERFAMILY Chaperone J-domain 103 172 IPR036869 -
Lapu11g01154 249 Pfam DnaJ domain 106 168 IPR001623 -
Lapu11g01154 249 Gene3D DnaJ domain 99 191 IPR036869 -
Lapu11g01154 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 37 247 IPR044618 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01154 Lapu-Chr11 13515185 13516869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01154 106 173 C2H2 Transcription Factor Family AT1G74250 37.500 5.22e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01154 K23051 - gmx:100819309 318.161