Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu11g01136 | ATGGCCCAGCAGTCATCTAGGCTCCAGCGTTTGCTTACTCTCCTGGACACTGGGTCAACCCAAGCTACAAGGTTGACCGCTGCTCGTCAGATAGGTGACATTGCAAAATCACACCCTCAAGACTTGACCAGTCTTCTCAAGAAGGTTTCTCAATATCTCCGCAGTAAAAATTGGGATACACGAGTTGCAGCTGCTCATGCAATTGGATCAATTGCTGAGAATGTTAAGCACATAAGTTTGACTGAACTTTTTGCTTCTATTGTATCAAAAATGAATGAGAATGGGATATCTTGTAGCATTGAGGATCTGTGTGCATGGCCGTATTTACAATCAAAAATTACTGGAAGCTCATTTAGAAGCTTTGATATGAACAAGGTGCTTGAATTTGGGGCCTTATTAGCATCAGGGGGTCAGGAATATGATATTGGAAACGATAATATAAAGAACCCAAAGGAGCGATTGGTTCGACAAAAGCAAAATCTTCGACGTCGTTTAGGTTTGGATGTCTGTGAACAATTTATGGATATCAGTGATGTAATAAGAGATGAAGATCTTATGGCATCCAAATCAGACTCACATCTGAACGGGATTGATCGTAGAGTTTTTACTTCTTGTTCTGCACATAACATCCAGAAAATGGTTGCAAACATGGTTCCTAGTGTGAAATCAAAGTGGCCCAGCGCAAGAGAATTGAATCTTTTAAAGCGTAAAGCAAAAATAAACTCAAAGGACCAAACAAAAAGCTGGTGTGAAGATGGTGGTACAGAGCCATCAGGTGCTCAAAGTTTGACTTCAAAAGGCACAGGTCCTGATTCACTGAATTACAGTAAGGTATTCATGGATGTTAATCATGATGACGATGGCATTGAGCATGATGGGGATGGGCAATGGCCTTTCCATACTTTTGTTGAGCAACTTATTATAGATATGTTTGATCCTGTTTGGGAGGTACGACATGGTAGTGTGATGGCACTGAGAGAGATTTTAGCACATCAAGGTGCTTCTGCTGGAGTATTTAAACCTGACTCACACATGGGTGGTACCTTGTTTATTGAATTAGAAGACAAAAGTATACCAAGCACAGTGAAGAGAGAGAGGGAAATTGATTTAAATATGCAAGTTTCAGCTGATGAGTTTGATTCAAACTTTAAGAGGCCAAAACTTGAAGATGTGTCATCATCAACCTTTGTGGATAGCGTGATGACTTGCAACAATGAAGGTGATATTAAAATCAGTATTACTTCTGAAACCCATGAATGCGATTTAACTTTGGATTACGGGAATGGGCAATTTAATGGTAATTCTGATGACATGGATCTGGAGTCTCACTCTGATGGCTCTCGTGATGCATGCAAAGAGTCTGCTAGCATAGCAGAACAGAAGGGTCATTTTGATGACAATAAGATTCCCTCTGGAAATCTTATTACACTGAGAAATCTTCCTCAGAACTGTGAGCTGATGAACTCTGTTAAAGTGGCTAGAAGTTCTTGGCTTCAAAACTGTGAATTTCTTCAAGATTGTGTGATACGCTTTTTGTGCGTGTTGTCACTTGATCGCTTTGGAGATTATGTATCTGATCAGGTTGTTGCTCCAGTGCGTGAAACCTGTGCACAGGCTTTAGGTGCTGCATTTAAGTATATGCATCCCACACTAGTAAATGAAACACTGAACATATTGTTGAGAATGCAGTGTAGGCCAGAATGGGAGATTCGTCATGGCAGTCTTCTTGGTATAAAATATTTGGTTGCTGTACGGCAGGAGTTGCTTTCCGATTTGCTTGGACGAGTTCTTCCTGCATGTAAATCTGGGTTGGAGGACCCAGATGATGATGTCCGGGCAGTTGCTGCTGATGCTTTAATACCAGCTGCATCTGCAATTGTTTCCTTGCAGGGTCAAACATTGCATTCAATTGTGATGCTTTTATGGGATATATTGCTTGATTTGGATGATTTAAGTCCGTCCACGAGCAGTGTAATGAATCTGCTGGCAGAAATCTATTCTCAAGAAGATATGGCACCAAATATGTATGAAGTTTTTAGATTGGGAGACAAGGAAATGGAAAACGGAGGAGGTGGTTGTGGTGATGGCGATGGAGAAGAAAATCCTTATGTGCTTTCAACATTGGCACAGCGATTGTGGCCCTTTATGAGGCATAGTATCACATCTGTTCGTTATTCTGCAATACGAACTTTGGAGAGGCTACTTGAAGCTGGATATAAAAGAAGCATGTCTGAGTTGTCTGGTGCTTCATTTTGGCCCTCTTCTATATTTGGAGATACACTTAGAATCGTCTTCCAGAATCTGCTATTGGAAACAAATGAGGATATTTTGCAATGTTCTGAGAGAGTTTGGAGTCTCCTTATTCAGTGTTCTATGGAGGACTTGGAGATGGCTGCGAGTTCTTATGTGGCTTCTTGGATAGAACTTGCATCTACACCATTTGGATCAGCATTAGATGCCTCAAAGATGTACTGGCCTGTTGCCTTTCCACGGAAAAGTCAAATTAGAGCAGCTGCTAAAATGAGAGCTGCAAAAATTGAAAATGAATGCGGTGTGGAATTTAGTCTTGATTCTATTAAAGGAACTACTGCACAAGATAGAAATGGAGATGTTCCTATGAATTCTGTTAAGATAGTCGTTGGTGCTGATGTGGACACGTCTGTAACTCATACCCGAGTAGTTACGGCAACTGCTTTGGGATATTTTGCTTCTAAGCTGCCAGTGGGTTCTTTAAAATATGTGATTGATCCACTGTGGAGCTCTCTAACCTCGTTCTCTGGTGTCCAACGACAGGTTGCATCTATGGTACTTATTTCTTGGTTCAAGGAGATTAAGGTCAAGAATTCGTCCAAAAACCTTGATGGTATCCCCGGTGCTCTGAAAGATTGGTTGCTGGACTTATTAGCATGTTCTGACCCAGCATTCCCGACAAAAGATTCACTTCTTCCTTATGCTGAGCTTTCCAGAACTTATGCAAAGATGCGGAGTGAGGCTGGTCAATTACTAAATGTAGTAAAATCTTCTGGTATGTTTGATGAGTTATTGACAGCAACTCAAATTGAGTTGGATCGCTTGAGTGTGGATGACGCCATTGGTTTTGCTTCAAAAATTCCAGCGTTGTGTAATGATAGTTCTGCAAATGAATCCTTGGCAAAGAACATCATGGATGATATAGAATCCTTCAAACAGAGACTCTTGACAACTTCTGGATATTTAAAATGTGTTCAGAGCAACTTGCATGTTACAGTCACATCTGCAGTTGCAGCTGCAGTTGTCTGGATGTCTGAATTTCCTACACGACTTACACCAATCATTTTGCCTTTGATGGCTTCCATCAGGCGAGAGCAGGAGGAAATACTACAAATGAAGTCTGCTGAGGCCCTTGCTGAGCTAATGTATCACTGTGTCGCACGGAGACCTTGCCCCAATGATAAATTAATCAAGAATATATGTAGTTTAACTTGCATGGATCCCTCTGAGACCCCTCAAGCAAAATCTCTTTGTACCATTGAGAGTATCGATGACCAAGGTCTGCTGTCTTTTAGAACTCCTGTGGGCAAACAGAAGTCAAAGGTCCATGTGCTGGCTGGTGAAGATCGTTCAAAGGTGGAGGGATTTTTAAGTAGACGTGGATCTGAGCTATCATTGAAGCTTCTATGTGAAAAGTTTGGTGCGTCATTATTTGATAAGCTTCCGAAGCTGTGGGATTGCCTTACTGAAGTTCTTAAACCTCTACCCGTCACTGAGGAAAAGCAAGTTACTGCATCTATTGAGTCTGTCAGTGATCCTCAGACCTTGATTAACAATGTCCAGGTGGTGCGCTCTGTTGCTCCCGTGTTAAATGAGGAGTTGAAACCAAAACTGTTGACGCTTCTTCCATGCATCTTCAAATGTGTTCAGCATTCTCATGTTGCTGTTAGATTAGCTGCTTCACGCTGCATCACATCTCTGGCACAGTCAATGACTGTGAAAGTCATGGGAGCTGTGGTTGAAAATGCTATCCCTATGTTAGAAGATTCATCATCTGTTTATGCTCGACAAGGAGCAGGCATGTTGATTAGTTTTCTTGTTCAGGGGCTGGGTGTAGAGTTGGTCCCTTATGCTCCTCTATTGGTAGTTCCACTTCTAAGGTGTATGAGTGATTGTGATCAGTCTGTCAGACAGAGTGTGACCCATAGTTTTGCTGCTCTTGTTCCTTTACTTCCTTTGGCACGAGGCCTTCCTCAGCCGATTGGACTAGGGGAAGGTGTATCCAGAAATGCAGAAGATTTGCAGTTTTTAGAGCAACTGCTTGACAACTCTCATATTGAAGATTACAAATTATGCACTGAATTGAAAGTAACATTGAGGAGGTATCAGCAAGAAGGCATTAATTGGTTAGCTTTTTTGAAACGTTTCAAGCTTCATGGAATTTTATGTGATGACATGGGACTTGGAAAGACAGTTCAAGCATCAGCAATTGTAGCCTCTGACATAGCTGAGCATCGGACTACAATTGGGAATGAGGATCTTCTGGCATCTTTAATTATCTGTCCATCAACTCTAGTTGGGCACTGGGCCTTTGAGATTGAGAAATATATTGATGCTTCTGTTATATCTAGTCTTCAATATGTTGGTTCTGCTCAGGAACGAATGCTTCTTCGAGATCATTTTTGTAAGCATAATGTCATTATAACATCATATGATGTTGTGCGTAAAGATGTTGATTTTCTGGCACAGCTGCTGTGGAATTACTGCATTTTAGATGAAGGGCATATAATAAAAAATGCGAAGTCTAAAGTTACAATTGCTGTAAAACAGTTGAAAGCCCAGCACCGCTTGATATTGAGTGGGACACCTATACAGAATAATATAATGGACTTGTGGTCCCTTTTTGATTTTCTGATGCCTGGATTTCTAGGAACTGAGAGACAGTTCCAAGCAGGATATGGAAAACCACTTTTAGCGGCAAGAGATCCAAAATGTTCTGCTAAGGATGCTGAAGCAGGAGTACTTGCTATGGAGGCATTGCATAAGCAGGTAATGCCTTTCCTCCTTCGTAGAACAAAGGATGAAGTCTTGTCTGATCTGCCAGAGAAAATAATTCAAGACAGATACTGTGATTTGAGCCCTGTACAGTATAAACTTTATGAACAGTTTTCTGGTTCTCGTGTAAAACAAGAAATGTCATCTATTGTAACAACGAATGAGTCTGCAGCACCAGAAGGAAGTGGCAGTTCTACTAAAGCGTCTTCACATGTTTTCCAGGCACTCCAATATTTGCTAAAACTCTGCAGTCATCCATTGCTTGTCATTGGTGAGAAGATTCCAGATTCACTTTTTACCATCCTCTTAGAACTGTTTCCTGCTGGCTCTGATATTGTTTCAGAACTTCACAAACTCCATCACTCCCCAAAATTAGTTGCTCTTCATGAGATTCTAGAAGAATGTGGAATTGGAGTTGATAATTCAGGTTCGGAGGGTGCAGTTAACGTTGGGCAGCATAGGGTCTTGATATTCGCTCAACATAAGGCTTTCCTGGATATAATTGAAAGAGATTTGTTTCAGACACACATGAAAAGTGTCACATATTTGCGGTTGGATGGATCAGTTGCCCCAGAAAAGCGTTTTGAAATTGTCAAAGCTTTCAATTCAGATCCTACCATTGATGTCTTACTGCTAACAACACATGTTGGTGGGCTTGGTTTGAACCTGACATCTGCAGATACCCTTGTCTTTGTGGAGCATGATTGGAATCCAATGCGAGACCATCAGGCTATGGATAGAGCACACAGGTTAGGTCAGAAAAAAGTAGTTAATGTCCATCGGCTAATAATGCGTGGTACTTTGGAAGAGAAAGTTATGAGTCTACAAAGATTCAAAGTGTCCGTGGCTAATGCTGTCATTAATGCTGAAAATGCTAGTATGAATACAATGAATACAGATCAGTTGCTTGATTTATTTGCATCAGCAGAAACTTCCAAAAAGGGTGCTACTGCTGTGAAGAGTTCAGAGAACAACAATGATGTAGACGCTAAATTAGTAGGCAGTGGGAAGAGATTGAAATCAATACTTGGCGGATTGGAGGAGCTATGGGACGAATCACAATATACAGAGGAGTACAATCTGAGTCAATTTTTAGCGAGGCTTAATGGCTAA | 6138 | 0.4115 | MAQQSSRLQRLLTLLDTGSTQATRLTAARQIGDIAKSHPQDLTSLLKKVSQYLRSKNWDTRVAAAHAIGSIAENVKHISLTELFASIVSKMNENGISCSIEDLCAWPYLQSKITGSSFRSFDMNKVLEFGALLASGGQEYDIGNDNIKNPKERLVRQKQNLRRRLGLDVCEQFMDISDVIRDEDLMASKSDSHLNGIDRRVFTSCSAHNIQKMVANMVPSVKSKWPSARELNLLKRKAKINSKDQTKSWCEDGGTEPSGAQSLTSKGTGPDSLNYSKVFMDVNHDDDGIEHDGDGQWPFHTFVEQLIIDMFDPVWEVRHGSVMALREILAHQGASAGVFKPDSHMGGTLFIELEDKSIPSTVKREREIDLNMQVSADEFDSNFKRPKLEDVSSSTFVDSVMTCNNEGDIKISITSETHECDLTLDYGNGQFNGNSDDMDLESHSDGSRDACKESASIAEQKGHFDDNKIPSGNLITLRNLPQNCELMNSVKVARSSWLQNCEFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPTLVNETLNILLRMQCRPEWEIRHGSLLGIKYLVAVRQELLSDLLGRVLPACKSGLEDPDDDVRAVAADALIPAASAIVSLQGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDMAPNMYEVFRLGDKEMENGGGGCGDGDGEENPYVLSTLAQRLWPFMRHSITSVRYSAIRTLERLLEAGYKRSMSELSGASFWPSSIFGDTLRIVFQNLLLETNEDILQCSERVWSLLIQCSMEDLEMAASSYVASWIELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENECGVEFSLDSIKGTTAQDRNGDVPMNSVKIVVGADVDTSVTHTRVVTATALGYFASKLPVGSLKYVIDPLWSSLTSFSGVQRQVASMVLISWFKEIKVKNSSKNLDGIPGALKDWLLDLLACSDPAFPTKDSLLPYAELSRTYAKMRSEAGQLLNVVKSSGMFDELLTATQIELDRLSVDDAIGFASKIPALCNDSSANESLAKNIMDDIESFKQRLLTTSGYLKCVQSNLHVTVTSAVAAAVVWMSEFPTRLTPIILPLMASIRREQEEILQMKSAEALAELMYHCVARRPCPNDKLIKNICSLTCMDPSETPQAKSLCTIESIDDQGLLSFRTPVGKQKSKVHVLAGEDRSKVEGFLSRRGSELSLKLLCEKFGASLFDKLPKLWDCLTEVLKPLPVTEEKQVTASIESVSDPQTLINNVQVVRSVAPVLNEELKPKLLTLLPCIFKCVQHSHVAVRLAASRCITSLAQSMTVKVMGAVVENAIPMLEDSSSVYARQGAGMLISFLVQGLGVELVPYAPLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGVSRNAEDLQFLEQLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTVQASAIVASDIAEHRTTIGNEDLLASLIICPSTLVGHWAFEIEKYIDASVISSLQYVGSAQERMLLRDHFCKHNVIITSYDVVRKDVDFLAQLLWNYCILDEGHIIKNAKSKVTIAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQAGYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQYKLYEQFSGSRVKQEMSSIVTTNESAAPEGSGSSTKASSHVFQALQYLLKLCSHPLLVIGEKIPDSLFTILLELFPAGSDIVSELHKLHHSPKLVALHEILEECGIGVDNSGSEGAVNVGQHRVLIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVAPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASMNTMNTDQLLDLFASAETSKKGATAVKSSENNNDVDAKLVGSGKRLKSILGGLEELWDESQYTEEYNLSQFLARLNG* | 2046 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu11g01136 | 2045 | FunFam | B-TFIID TATA-box-binding protein-associated factor 1 | 1419 | 1680 | - | - | |
| Lapu11g01136 | 2045 | Gene3D | - | 1196 | 1407 | IPR011989 | - | |
| Lapu11g01136 | 2045 | SMART | helicmild6 | 1841 | 1927 | IPR001650 | - | |
| Lapu11g01136 | 2045 | Gene3D | - | 4 | 94 | IPR011989 | - | |
| Lapu11g01136 | 2045 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1817 | 1975 | IPR001650 | - | |
| Lapu11g01136 | 2045 | SMART | ultradead3 | 1445 | 1641 | IPR014001 | - | |
| Lapu11g01136 | 2045 | MobiDBLite | consensus disorder prediction | 251 | 269 | - | - | |
| Lapu11g01136 | 2045 | FunFam | TATA-binding protein-associated factor BTAF1 | 1201 | 1407 | - | - | |
| Lapu11g01136 | 2045 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1432 | 1681 | IPR027417 | - | |
| Lapu11g01136 | 2045 | Pfam | Helicase conserved C-terminal domain | 1825 | 1927 | IPR001650 | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu11g01136 | K15192 | - | gmx:100777977 | 3667.47 |
Showing 1 to 1 of 1 entries