Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01133 ATGATGAAAAGAACTTCAAGAGAAGTTTTGATATGCGCGGAATCAACAAAGCTATTGGAGAGTTTGCTCTTTTTCTTCGATTTCAATGCTTCCCGGCTGCCACTCAAAACTTTGCACTTTCCAGCTTTGCCCCCGAATCTTGTCCTAATGGCCAAGAGTCCCTGTCTCATACCCTTTTTCCAGTTCTTGGCAATGCTCTTTCTCACCTCCTACTCTATTTTCCCGCCTTGTGTGTCTCTGACGTTGGAAACCCACGCTCTTTTTCAGTTCAAGAACCATTTGAAGGATTCCTTGAATTATTTGGCTTCCTGGAATCAATCAGACTCTCCATGTGAGTTTTATGGAATTACATGTGATCAAGTTTCTGGGAGAGTCACAGAAATCTCACTGGAGAATAAGTCCCTCTCTGGTGTCATTTTCCCCTCACTCCCAGTTTTGCAGAGCCTGCAAGTTCTCTCACTACCATCCAATTTAATTTCCGAAAAGCTTCCATCAGAAATAAGCAGGTGGACCAACCTCAGAGTGTTGAATCTAACGGGAAATCAATTGGTTGGAGCAATCCCAGACTTGTCTGGGCTGAGAAACCTGCAAATTCTTGACCTTTCAGCAAACTACTTTTCTGGAAGCATCCCTAGCTGGGTGGGGAATCTAACTGGACTGATTTCACTGGGTCTTGGGGAAAATGCATACAGTGAAGGTGAGATTCCTGGAACTCTTGGAAATCTGAAGAACTTGACCTGGCTTTATCTTGGTGGCTCCCATTTGATTGGAGAAATTCCAGAATCACTGTATGAAATGAAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATTTCTGGAAGACTCTCCAGATCAATTTCCAAGTTAGAGAATCTTTACAAGATTGAGCTCTTCTCAAATAATTTGACAGGAGAGGTTCCAGCAGAGCTTGCAAACCTCACCAATCTGCAGGAAGTTGACCTTTCTGCAAACAACATGTATGGTAGGTTGCCAGAGGAAATTGGGAATATGAAGAACTTGGTTGTTTTTCAATTATATGAAAACAGATTTTCTGGAGAACTTCCTGCAGGATTTGCAGATATGCGCCATCTCATTGGGTTCTCAATATATAGAAACAGCTTCACCGGGACAATTCCAGAAAATTTTGGCCGGTTTTCACCACTTGAAAGTATTGACATATCTGAGAATCAATTTTCAGGCGATTTCCCAAAGTTCTTGTGTGAAAGAAATAAGTTGAGGCTTTTGCTAGCGTTGCAAAACAATTTCTCGGGGACTTTTCCGGAGTCTTATGTTACATGTAAATCACTGGAGAGATTTAGGATCAGTATGAACCAGTTATCTGGGAAAATTCCAGATGAGGTTTGGGCACTTCCATATGCAAAAATAATTGATTTGGCCTATAATGATTTCACTGGTGTGGTACCTTCAGAAATTGGGTTGTCTACTAGCTTAAGTCAGATAGTTTTGACAAAAAACAGGTTTTCAGGTAAGCTCCCATCAGAGCTTGGCAAGCTGGTAAACTTGGAGAAGCTTTACTTGAGCAACAATGATTTCTCTGGTGAAATACCTCCTGAAATTGGATCTCTGAAGCAGTTATCCTCTTTGCATGTAGAAGTAAATTCCTTAACTGGTTCAATACCAGCAGAACTGGGTCATTGTGCAAGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTGTCTGGAAATATTCCCCAGTCTGTTTCACTTATGATCTCATTGAACTCTCTTAACATATCTAGAAACAAGCTTACAGGTTCTATTCCCGATAATTTAGAAGCCATAAAGCTAAGCTCGTTGGATTTTTCTGAAAACCTGCTTTCTGGAAGAATTCCATCTGGTCTTTTTATTGTTGGAGGAGAGAAAGCTTTTATTGGAAACAAGGGGCTGTGTTTAGAGGGAAACCTAAAACCTTCCCTGAATTCTGATTTGAAGATTTGTGCCAAAAATCATGGTCGGCCAAGGGTCTCTGCTGATAAATTTGTCTTTCTCTTTCTCATTGCTTCTATTTTTGTTGTTATTTTAGCTGGTTTGCTGCTTTTGAGTTGTAAAAGCCTCAAGCATGGTGCAGAAAATAACATGCAACGTCAGAAGGAAGTAAGTCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATCGATGCTGATGAAATATGTAATCTGGATGAAGATAATTTGATAGGTAGGGGTGGCACGGGAAAGGTTTATCGAGTGGAGTTGAGGAAAAATAGAGCCATGGTGGCTGTCAAGCAACTAGGGAAAATAGATGGTGTGAAAATTTTAGCCGCAGAGATGGAGATTCTGGGGAAAATTAGGCATAGAAATATACTTAAACTCTATGCTTCTTTACTTAAAGGAGGATCCAACCTTTTAGTGTTTGAGTACATGTCAAATGGAAATCTTTTTCAAGCTCTTCACGGACAGATAAAAGATGGGAAGCCAGACTTGGATTGGAAACAGAGGTATAAAATTGCTCTGGGAGCTGCGAAAGGGATTGCTTATTTACACCATGACTGTAGTCCCCCCATTATTCACAGGGATATAAAATCCAGCAACATTTTGCTTGACGAGGATTATGAGCCAAAAATTGCTGATTTTGGTATTGCAAGGTTTGTAGAAAAATCTGATAAGCAGTTGGGTTATAGCTGTCTAGCTGGCACACTTGGTTATATTGCTCCAGAACTTGCTTATGCCACTGACATCACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTACTGTTAGAATTAGTGTCCGGCAGAGAACCCATTGAAGAGGATTATGGAGAGGCGAAGGATATTGTTTATTGGGTTTTGACTCATCTGAATGACCGTGAAAGTATTCTCAATATTCTTGATGAAAGGGTGGCATCTGGGTCTGTTGAAGATATGATGAAAGTGTTGAAGATTGGCATCAAGTGCACCACTAAGCTTCCATCTGTGCGTCCCACCATGAGAGAGGTTGTTAAGATGCTAATCGATGCAGAACCTTGTGCATTGAAATCTCCAAAATTCCGTCATGACAAAGACACAAAGGCCCTTCTCTGA 3072 0.4076 MMKRTSREVLICAESTKLLESLLFFFDFNASRLPLKTLHFPALPPNLVLMAKSPCLIPFFQFLAMLFLTSYSIFPPCVSLTLETHALFQFKNHLKDSLNYLASWNQSDSPCEFYGITCDQVSGRVTEISLENKSLSGVIFPSLPVLQSLQVLSLPSNLISEKLPSEISRWTNLRVLNLTGNQLVGAIPDLSGLRNLQILDLSANYFSGSIPSWVGNLTGLISLGLGENAYSEGEIPGTLGNLKNLTWLYLGGSHLIGEIPESLYEMKALETLDISRNKISGRLSRSISKLENLYKIELFSNNLTGEVPAELANLTNLQEVDLSANNMYGRLPEEIGNMKNLVVFQLYENRFSGELPAGFADMRHLIGFSIYRNSFTGTIPENFGRFSPLESIDISENQFSGDFPKFLCERNKLRLLLALQNNFSGTFPESYVTCKSLERFRISMNQLSGKIPDEVWALPYAKIIDLAYNDFTGVVPSEIGLSTSLSQIVLTKNRFSGKLPSELGKLVNLEKLYLSNNDFSGEIPPEIGSLKQLSSLHVEVNSLTGSIPAELGHCARLVDLNLAWNSLSGNIPQSVSLMISLNSLNISRNKLTGSIPDNLEAIKLSSLDFSENLLSGRIPSGLFIVGGEKAFIGNKGLCLEGNLKPSLNSDLKICAKNHGRPRVSADKFVFLFLIASIFVVILAGLLLLSCKSLKHGAENNMQRQKEVSQKWKLASFHQVDIDADEICNLDEDNLIGRGGTGKVYRVELRKNRAMVAVKQLGKIDGVKILAAEMEILGKIRHRNILKLYASLLKGGSNLLVFEYMSNGNLFQALHGQIKDGKPDLDWKQRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGIARFVEKSDKQLGYSCLAGTLGYIAPELAYATDITEKSDVYSFGVVLLELVSGREPIEEDYGEAKDIVYWVLTHLNDRESILNILDERVASGSVEDMMKVLKIGIKCTTKLPSVRPTMREVVKMLIDAEPCALKSPKFRHDKDTKALL* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01133 1023 SMART LRR_typ_2 314 338 IPR003591 -
Lapu11g01133 1023 SMART LRR_typ_2 193 217 IPR003591 -
Lapu11g01133 1023 SMART LRR_typ_2 266 290 IPR003591 -
Lapu11g01133 1023 SMART LRR_typ_2 146 170 IPR003591 -
Lapu11g01133 1023 SMART LRR_typ_2 506 530 IPR003591 -
Lapu11g01133 1023 SMART LRR_typ_2 578 602 IPR003591 -
Lapu11g01133 1023 SUPERFAMILY L domain-like 107 425 - -
Lapu11g01133 1023 ProSitePatterns Protein kinases ATP-binding region signature. 735 758 IPR017441 GO:0005524
Lapu11g01133 1023 Pfam Leucine rich repeat N-terminal domain 83 119 IPR013210 -
Lapu11g01133 1023 FunFam Leucine-rich repeat receptor protein kinase EMS1 260 343 - -
Lapu11g01133 1023 Gene3D Ribonuclease Inhibitor 364 647 IPR032675 -
Lapu11g01133 1023 Gene3D Ribonuclease Inhibitor 80 229 IPR032675 -
Lapu11g01133 1023 ProSiteProfiles Protein kinase domain profile. 729 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01133 1023 Gene3D Transferase(Phosphotransferase) domain 1 804 1015 - -
Lapu11g01133 1023 SMART serkin_6 729 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01133 1023 FunFam Receptor-like protein kinase HSL1 344 646 - -
Lapu11g01133 1023 CDD STKc_IRAK 735 1000 - -
Lapu11g01133 1023 Pfam Protein kinase domain 731 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01133 1023 SUPERFAMILY Protein kinase-like (PK-like) 725 1000 IPR011009 -
Lapu11g01133 1023 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Lapu11g01133 1023 Gene3D Phosphorylase Kinase; domain 1 698 803 - -
Lapu11g01133 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 804 1017 - -
Lapu11g01133 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Lapu11g01133 1023 Gene3D Ribonuclease Inhibitor 291 363 IPR032675 -
Lapu11g01133 1023 Gene3D Ribonuclease Inhibitor 230 290 IPR032675 -
Lapu11g01133 1023 FunFam Probable inactive receptor kinase RLK902 80 234 - -
Lapu11g01133 1023 FunFam Leucine-rich receptor-like protein kinase family protein 719 803 - -
Lapu11g01133 1023 Pfam Leucine Rich Repeat 508 530 IPR001611 GO:0005515
Lapu11g01133 1023 Pfam Leucine Rich Repeat 269 290 IPR001611 GO:0005515
Lapu11g01133 1023 Pfam Leucine rich repeat 194 255 IPR001611 GO:0005515
Lapu11g01133 1023 SUPERFAMILY L domain-like 340 599 - -
Lapu11g01133 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 266 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01133 Lapu-Chr11 13357180 13368860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01133 73 1010 Receptor kinase-like Gene Family AT1G72180 56.540 0.0 1027
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu11g01133 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01133 - - gmx:100789704 1689.09