Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01126 ATGGCTTCCTCTAATGGTGGTGTGCCGCCGGGATTTAGGTTTCATCCAACGGATGAAGAGCTTCTTCATTACTACTTGAAGAAGAAGGTCTCCTTTCAGAAGGTTGACATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGTAGAATTGGATCAACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTATCCTACAGGTTCAAGGACTAATAGAGCAACGAATGCAGGGTTTTGGAAAGCAACAGGAAGAGATAAGTGCATTAGGAACAGCTACAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGAAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCATGAGTACCGTCTAGAAGATGGCAACGACCCCCAAGGAAGTGCCAATGAAGATGGGTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAACTTATTCAAGATTGGAAATGAAGGTGGCTCTACACATAATCCAGATCAACAGATGAACAATTCCTCAGGCACTAATGGACGCACCTTCATGCATAGAGAAAATCATTACTTGCTACACCAACAGCAAAATCCCAGGAACTCATCAGGGCTTGAGCTTGACAAGCCTGAGCTGGCTCTCCATTACCCACACTTGCAAAATCCGCAATACTCACTGTTCCAATCCCAAAGTCTTCTTCAAACGCAAAAACCTATGGTTTATGATTATTCATATGCATCATCATCTCTACCTTCAGACACCCCTATCATGGCGAAGCAACTGATGGGGAACCCTAGGGACTGTGAAAGTGGCAGTGACGGCCTAAGATATCAGGTTTCGGAGTCTGGAATGGAAGTTGGATCGTGTGAACCAAATCAAGAAATGGGTGGCGGAAGAGGAGAAGGAATAAACGAATGGGGCGTCCTTGACAGGCTAGTTACCTCTCATCTTGGAAATGAAGACACAAACAAAGGGGTGAGGTTTGAAGAGCCAAATCCACAGTCTGTGCATCAGATCAACCAACTTTCATTACGGGGAGAGATGGACTTCTGGGCCTACGGAGGAAAACAATGA 1092 0.4469 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKVDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIGNEGGSTHNPDQQMNNSSGTNGRTFMHRENHYLLHQQQNPRNSSGLELDKPELALHYPHLQNPQYSLFQSQSLLQTQKPMVYDYSYASSSLPSDTPIMAKQLMGNPRDCESGSDGLRYQVSESGMEVGSCEPNQEMGGGRGEGINEWGVLDRLVTSHLGNEDTNKGVRFEEPNPQSVHQINQLSLRGEMDFWAYGGKQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01126 363 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lapu11g01126 363 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Lapu11g01126 363 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Lapu11g01126 363 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lapu11g01126 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 221 - -
Lapu11g01126 363 FunFam NAC domain-containing protein 17 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01126 Lapu-Chr11 13322189 13324593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01126 1 356 NAC Transcription Factor Family AT1G33280 53.719 6.83e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu11g01126 NAM 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01126 - - gmx:100804181 684.485