Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01118 ATGTCGTCCACCACTCCACCGCCTTATTCTCCGCACAAACCCGATCAAGACCATCCTGCTCCGGGGATACCGTCGTCGCCCGCCAGCAGAGCTAAGCTCCAGAAGATCCCGCCCATTCCTATTCGACGGAGTAAGTTAGGCAATGAAGATCAGGAAGAAGAGGAAGGCGAACGCGCTGATTCTTCTTCAATCTTGCTGGCGTCCTCTTTAGGTCTGAATCACATTCGAACGCGTTCTTCCTCTTCGCCTCTTCGCTATTCCTCCTCCGTTGGCGCTCCTTCCTTCCTCACACAGAATGCTGTTACTATCAATGACGCCAAATTTAGATCCAAATCTAGTTCCCAACCAAAAAAAGACCCAGGGGAAAACGTTCATTTGAATCAATCCAAATCGCTCAGAGCTCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGCAGCGTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATTCTGCGACTTACCAGTGGACGCAAAAAGAGAAACCCTGATATCAAAAGCTTTTCCCACGAACTCAACTCCAAGGGAGTTAGACCATTTCCAACCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCGGCGATTAGAGCTAAGTTTGAAAAATTAAAGGAAGAAGTTGACTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGCATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAGGTTGGAGGATCTGTTGGTTGTTGCTCAGCAATGTGCAAAGATGTCTCCTACCAAGTTTTGGATCAAATGCGAATCTATTGTTCAAAGTCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCTCTCGTTGCACTCGCTTAGTACAATTACAGAAGGAAAGCGGATTTGAACAAGATCACATTCTGGGTCTTCACCAACTCAGCGACCTTGGGGTCTATCCTGAGCAAATTTTGAAGGCCGCGCAGCAGAATTCAAGTATATCACCCGCTGGGCACGAGATGAATGAGAAACAGTTAAAAATGTCACACAGTAAAGAGAAAGACAAACGGACAACAGCACAGAGTAAAGCTGACCGACAATTAAGTGTTGCGATTGAAGATGCGGAGGTTAATACAGTCAAGAGTATTGAATCAACTCCTGGCAGCTATAGGATGTCTTCTTGGAAAAAGTTTCCACCTGTTGTTGAGAAAAAGCGAAAAGATCAAGATGCTGTAAATTCCCCAGCCAAAGGTGAAATTGATCACTTACTAGTCAAAGAAGAAAATACTGAAACTTTGGATACTTCCTCTTGTCATCCTGAACATTCACAATCATCAACAAGAACGCGAAAGGTTTCTTGGGGATTCTGGGGAGACCAGCAAAATCTTACATACGAGGATTCAATGATATGCAGGATTTGCGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACTATTGAAAGGATACTGGAATCCTGGACACCAAAAAGCACACCGAAAAGCACTGATACTCCAGGAGAAAGCTTTGACCTTACCACTTCAAGTGTGCTTGAAGAGTTCAATGATTTATCTCTAGACAGAAATAACCTGACTTGTAGATGCTCTGAAGACATGCTCGACTCTACTACGGAGCCTGACAATACTTTTGTCATGGACGATCTGAACCTTTCACCCAGAATATCATGCGAAGCACGAATCTGCTTAAAACCTGATCATGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAGGTAGAAATGTTACTAAGTGGACGAAGAACATTGTCTGAACTTGAAAGTTGTGACCAGATAAACAAGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCAATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCTCTTTGCGGGCAGATAGAAGATGAAAAGGTGGACTCATCAAATAGCGTGGCTGACGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAACGCTTGTTCAAAGGATCGAACCTCTATTGAAGACTTTGAAATAATAAAACCCATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTTCGAAATCCTTTTGTGGTTCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCAATGTTGAGAAATCTGGGTTGCTTAGATGAACAAATGACTCGAGTATATATTGCAGAAGTTGTTCTTGCCTTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGCCATATTAAGTTGACAGATTTCGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCATTTTCCGCCACTGGTTTCCTAGGAGAGGATGAACCAAAACCTCGACATTCTTCAAAACGGGAAGAACGTCAAAAACAATCCGTAGTTGGCACCCCAGATTACTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTGGGTGTCATACTATATGAGCTTCTTGTTGGTATTCCACCATTTAATGCTGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCAGATGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAATCCAGTCCAAAGATTAGGCGCAACAGGAGCTACAGAAGTTAAACGCCACGCCTTCTTTAAGGATGTTAACTGGGATACACTAGCAAGGCAGAAGGCTATGTTCATTCCATCTGCGGAAGCTCTTGATACAAGTTATTTTATGAGTCGGTACATTTGGAATCCCGAGGACGAACATTGTCTCGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGTAGTGGTTCAGGCAGCGATTTGTTAGATGAAGATGGTGATGAGTGTGGTAGTTTAGCAGAGTTCGGTGGTCCAGCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCTTCTATAAATTATGATTTGGTGATTAAGAACTCCAGGGAATCAACTCAATGA 3507 0.4232 MSSTTPPPYSPHKPDQDHPAPGIPSSPASRAKLQKIPPIPIRRSKLGNEDQEEEEGERADSSSILLASSLGLNHIRTRSSSSPLRYSSSVGAPSFLTQNAVTINDAKFRSKSSSQPKKDPGENVHLNQSKSLRAHSQLIPVLEGHHAAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPTWKHRAFGHMEEVMAAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLVCDREWRERLEDLLVVAQQCAKMSPTKFWIKCESIVQSLDDKRQELPVGILKQAHTRLLFILSRCTRLVQLQKESGFEQDHILGLHQLSDLGVYPEQILKAAQQNSSISPAGHEMNEKQLKMSHSKEKDKRTTAQSKADRQLSVAIEDAEVNTVKSIESTPGSYRMSSWKKFPPVVEKKRKDQDAVNSPAKGEIDHLLVKEENTETLDTSSCHPEHSQSSTRTRKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFDLTTSSVLEEFNDLSLDRNNLTCRCSEDMLDSTTEPDNTFVMDDLNLSPRISCEARICLKPDHGTKVSSAGSLTPRSPLVTPRTTQVEMLLSGRRTLSELESCDQINKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYISLCGQIEDEKVDSSNSVADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEQMTRVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSATGFLGEDEPKPRHSSKREERQKQSVVGTPDYLAPEILLGMGHGVTADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPDEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDVNWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDGDECGSLAEFGGPALEVQYSFSNFSFKNLSQLASINYDLVIKNSRESTQ* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01118 1168 ProSiteProfiles Protein kinase domain profile. 766 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01118 1168 Pfam Protein kinase domain 766 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 355 378 - -
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 928 954 - -
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 935 953 - -
Lapu11g01118 1168 Gene3D Phosphorylase Kinase; domain 1 764 1081 - -
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 1 21 - -
Lapu11g01118 1168 FunFam probable serine/threonine protein kinase IREH1 764 854 - -
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 355 374 - -
Lapu11g01118 1168 PANTHER SERINE/THREONINE-PROTEIN KINASE 444 1110 - -
Lapu11g01118 1168 MobiDBLite consensus disorder prediction 1 62 - -
Lapu11g01118 1168 SMART serkin_6 766 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g01118 1168 Gene3D Transferase(Phosphotransferase) domain 1 850 1072 - -
Lapu11g01118 1168 SUPERFAMILY Protein kinase-like (PK-like) 763 1081 IPR011009 -
Lapu11g01118 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Lapu11g01118 1168 ProSiteProfiles AGC-kinase C-terminal domain profile. 1055 1155 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu11g01118 1168 CDD STKc_MAST_like 772 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01118 Lapu-Chr11 13255547 13266816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01118 1 1168 AGC Kinase Gene Family AT5G62310 62.469 0.0 1447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lapu11g01118 Pkinase 2.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01118 - - gmx:100817975 2012.65