Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g01114 ATGGCGTTGCACGCTCTCTTTAGAATACTTGTATCACTTCTATTCCTCTCAACCTTTCTCCAATTAGCAGCATCTGCGTCCTCCAAATCCACAACCACCTCTGATTCCCTCAAAGCCTACAAAAAGTTCATAAAAGAACAGTGCAACTCAACCACTTATCCAAAAGTTTGCTACAACTCTCTCTCCCCATATGCATCAAAAATCAAAAGAAACCGCGTAACACTCACCAAACTTTCCATTCATGTGGCTCTGAAAGCATCCAAGAGTGCAAAAAGCACATTGACAAAGCTGTCGAAGGGGAAGCTAACACATGGAGAAACGTCGGTCATTGCAGACTGCCGAGAGAACATAGAGGACGCGTTGGATCTGCTTCAGCAATCTGCTGATGGGTTGGCACATTTGAACGGTACCTCTACTGCTGACCAGAAGTTTCAATGGGATAACATCAAGACCTGGTTGAGTGCTTCCATAACAGATGAGTATACATGCACCGATGAGTTTGATGAAATACAAGTTGCTGCAAGAATCACTTTGTGGGACGAAGTGTTAGTTGATCAACAGACTTTTGTTCCATCTTACGTTTAA 585 0.4325 MALHALFRILVSLLFLSTFLQLAASASSKSTTTSDSLKAYKKFIKEQCNSTTYPKVCYNSLSPYASKIKRNRVTLTKLSIHVALKASKSAKSTLTKLSKGKLTHGETSVIADCRENIEDALDLLQQSADGLAHLNGTSTADQKFQWDNIKTWLSASITDEYTCTDEFDEIQVAARITLWDEVLVDQQTFVPSYV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g01114 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 170 IPR035513 -
Lapu11g01114 194 NCBIfam pectinesterase inhibitor domain 12 171 IPR006501 GO:0004857
Lapu11g01114 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 183 IPR035513 -
Lapu11g01114 194 CDD PMEI-like_3 48 178 - -
Lapu11g01114 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 169 - -
Lapu11g01114 194 Pfam Plant invertase/pectin methylesterase inhibitor 42 170 IPR006501 GO:0004857
Lapu11g01114 194 SMART PMEI_2 39 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g01114 Lapu-Chr11 13239863 13242196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g01114 32 171 Carbohydrate Esterase AT1G53840 33.571 7.22e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g01114 - - gmx:100776299 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g01114 11 13239863 13242196 Lapu11g01114 11 13239863 13242196 ECH